RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 CRPP02741 224 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 RPSAP08865 295 aaKnown RBP0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 CXCL3P19876 107 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 SLCO1A2P46721 670 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 CXCR4P61073 352 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 ELOBQ15370 118 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 SLC36A2Q495M3 483 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 C9orf64Q5T6V5 341 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 TNFAIP8L2Q6P589 184 aaPredicted RBP0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 DCXRQ7Z4W1 244 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 GPHB5Q86YW7 130 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 Q8N402 240 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 SMIM19Q96E16 107 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 Q96M85 177 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 TTTY13Q9BZ97 58 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 ANGPT4Q9Y264 503 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 TGP01266 2768 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 TENM3Q9P273 2699 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 MICAL3Q7RTP6 2002 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 HEATR5AQ86XA9 2040 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 BAZ2BQ9UIF8 2168 aaKnown RBP0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 OTOGQ6ZRI0 2925 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 TRAV7A0A075B6U4 112 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 TRAV38-1A0A0B4J264 116 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 TRAPPC13A5PLN9 417 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 NDUFS6O75380 124 aaKnown RBP0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 ADAP1O75689 374 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 LGALS1P09382 135 aaKnown RBP0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 PSMB6P28072 239 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 HAAOP46952 286 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 CDC34P49427 236 aaPredicted RBP0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 CLDN12P56749 244 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 LRRC75BQ2VPJ9 315 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 C5orf46Q6UWT4 87 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 RASSF6Q6ZTQ3 369 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 C7orf65Q6ZTY9 151 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 FP248Q71RG6 208 aaPredicted RBP0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 SLC36A1Q7Z2H8 476 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 DYNAPQ8N1N2 210 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 RIBC1Q8N443 379 aaPredicted RBP0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 UBL4BQ8N7F7 174 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 HAVCR2Q8TDQ0 301 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 RAB2BQ8WUD1 216 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 GNPNAT1Q96EK6 184 aaPredicted RBP0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 IMMP2LQ96T52 175 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 GMEB1Q9Y692 573 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 HIVEP1P15822 2718 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 SPTAN1Q13813 2472 aaKnown RBP0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 FLT4P35916 1363 aa0.7□□□□□ -2.3
RNU6-48P-201ENST00000384161 CNOT1A5YKK6 2376 aaKnown RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 SCAF11Q99590 1463 aaKnown RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 RIF1Q5UIP0 2472 aaKnown RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 TMED7-TICAM2A0A0A6YYA0 188 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 A0A0D9SEW6 157 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 TINCRA0A1B0GVN0 87 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 DISC1C4P0D8 188 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 COX7A2LO14548 114 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 BIRC5O15392 142 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 PLA2G10O15496 165 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 CALUO43852 315 aaPredicted RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 NPPAP01160 153 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 MSMBP08118 114 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 KRTAP10-4P60372 401 aaPredicted RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 RAB14P61106 215 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 JOSD1Q15040 202 aaPredicted RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 ACSM3Q53FZ2 586 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 FAM78BQ5VT40 261 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 SBSNQ6UWP8 590 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 PLEKHG7Q6ZR37 379 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 NAA40Q86UY6 237 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 RPP25LQ8N5L8 163 aaKnown RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 ATP6V1G3Q96LB4 118 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 KCTD7Q96MP8 289 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 ADAT1Q9BUB4 502 aaKnown RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 DERL2Q9GZP9 239 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 CHST6Q9GZX3 395 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 FKBP14Q9NWM8 211 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 AK3Q9UIJ7 227 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 RBM7Q9Y580 266 aaKnown RBP0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 PIEZO2Q9H5I5 2752 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 ARFGEF3Q5TH69 2177 aa0.69□□□□□ -2.3
RNU6-48P-201ENST00000384161 NF1P21359 2839 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 IGHV1-69-2A0A0G2JMI3 117 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 MEIS3P1A6NDR6 274 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 OR51F1A6NGY5 319 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 M0QX08 132 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 SSNA1O43805 119 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 IL3P08700 152 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 UGT2B7P16662 529 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 MSNP26038 577 aaKnown RBP0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 RPL28P46779 137 aaKnown RBP0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 POLR2GP62487 172 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 PLCXD2Q0VAA5 305 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 MED21Q13503 144 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 BATFQ16520 125 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 MOGQ16653 247 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 NDUFA5Q16718 116 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 Q1T7F1 81 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 ARHGAP11BQ3KRB8 267 aa0.68□□□□□ -2.3
RNU6-48P-201ENST00000384161 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms