RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 LRRK1Q38SD2 2015 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 SERTM2A0A1B0GWG4 89 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 G3V4G9 280 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 ZIC3O60481 467 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 LIPFP07098 398 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 SUMO3P55854 103 aaPredicted RBP9.23□□□□□ -0.93
USP6NL-202ENST00000379237 IGLC1P0CG04 106 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 KIR3DS1Q14943 382 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 CPT1CQ8TCG5 803 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 SDK2Q58EX2 2172 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 TET1Q8NFU7 2136 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 LAMTOR5O43504 91 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 CELA2BP08218 269 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-202ENST00000379237 CRYBA4P53673 196 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 UBE2L3P68036 154 aaKnown RBP9.22□□□□□ -0.93
USP6NL-202ENST00000379237 CENPVQ7Z7K6 275 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-202ENST00000379237 GALMQ96C23 342 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 TAAR6Q96RI8 345 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 YLPM1P49750 1951 aaKnown RBP9.22□□□□□ -0.93
USP6NL-202ENST00000379237 SCN10AQ9Y5Y9 1956 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 IZUMO1RA6ND01 250 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 LRRC30A6NM36 301 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 FCGR3BO75015 233 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 OR1C1Q15619 314 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 OR4A5Q8NH83 315 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 SFXN3Q9BWM7 321 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 IGKV1-27A0A075B6S5 117 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 DEFB108AA8MXU0 73 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 SYS1-DBNDD2H3BUS1 97 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 RRHO14718 337 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 CCL2P13500 99 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 PLGLB1Q02325 96 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 MEF2CQ06413 473 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-202ENST00000379237 RFESDQ8TAC1 157 aa9.22□□□□□ -0.93
USP6NL-202ENST00000379237 ZNF407Q9C0G0 2248 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 ZNF318Q5VUA4 2279 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 MPDU1O75352 247 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 IGKV1-5P01602 117 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.93
USP6NL-202ENST00000379237 MRPL27Q9P0M9 148 aaKnown RBP9.21□□□□□ -0.93
USP6NL-202ENST00000379237 ZFAND5O76080 213 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 SAMD5Q5TGI4 173 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 LILRA6Q6PI73 481 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 TEPPQ6URK8 271 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 SGK494Q96LW2 274 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 MRPL13Q9BYD1 178 aaKnown RBP9.21□□□□□ -0.93
USP6NL-202ENST00000379237 ZDBF2Q9HCK1 2354 aa9.21□□□□□ -0.93
USP6NL-202ENST00000379237 A0A096LPE4 126 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 A0A1W2PPZ6 126 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 GAGE12HA6NDE8 117 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 DUX1O43812 170 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 GPR12P47775 334 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 ANKRD37Q7Z713 158 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 CNOT1A5YKK6 2376 aaKnown RBP9.21□□□□□ -0.94
USP6NL-202ENST00000379237 FAM87AP0C7U9 286 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 FGF12P61328 243 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 TMEM14EPQ6UXP3 125 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 DRAM1Q8N682 238 aa9.21□□□□□ -0.94
USP6NL-202ENST00000379237 IGHV3-43A0A0B4J1X8 118 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 A0A1W2PRE2 83 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 NPIPB13A6NJU9 1138 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 NPIPB4C9JG80 1138 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 K7EP34 96 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 IGHV3-43DP0DP04 118 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 IGLV3-21P80748 117 aaPredicted RBP9.2□□□□□ -0.94
USP6NL-202ENST00000379237 RHBDD2Q6NTF9 364 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 UCN2Q96RP3 112 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 OSTCQ9NRP0 149 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 ZNF391Q9UJN7 358 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 TEX48A0A1B0GUV7 120 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 A0A1B0GWB2 263 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 C9orf118A6NHY6 69 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 FOXI3A8MTJ6 420 aaPredicted RBP9.2□□□□□ -0.94
USP6NL-202ENST00000379237 TNFSF11O14788 317 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 CEACAM21Q3KPI0 293 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 ADAMTSL5Q6ZMM2 481 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 ODF3L1Q8IXM7 274 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 OR10D3Q8NH80 312 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 NPVFQ9HCQ7 196 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 TNFRSF19Q9NS68 423 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 CELA3BP08861 270 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 MYF5P13349 255 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 COL4A4P53420 1690 aaPredicted RBP9.2□□□□□ -0.94
USP6NL-202ENST00000379237 RALGAPA1Q6GYQ0 2036 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 OR2M7Q8NG81 312 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 PGLYRP4Q96LB8 373 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 FOXB1Q99853 325 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 C11orf1Q9H5F2 150 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 PSG11Q9UQ72 335 aa9.2□□□□□ -0.94
USP6NL-202ENST00000379237 RAMP3O60896 148 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 CLDN14O95500 239 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 SLAQ13239 276 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 DEFB133Q30KQ1 61 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 TPRX1Q8N7U7 411 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 BLNKQ8WV28 456 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 STRADBQ9C0K7 418 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 NGFP01138 241 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 GRPP07492 148 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms