RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 OR4A16Q8NH70 328 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 RNASE7Q9H1E1 156 aaKnown RBP13.67□□□□□ -0.22
TRIM39-201ENST00000376656 HES4Q9HCC6 221 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 UQCR10Q9UDW1 63 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 TCL1AP56279 114 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 RPP30P78346 268 aaKnown RBP13.67□□□□□ -0.22
TRIM39-201ENST00000376656 FXYD3Q14802 87 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 TMEM136Q6ZRR5 245 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 DOLPP1Q86YN1 238 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 WDR31Q8NA23 367 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 OR4P4Q8NGL7 312 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 KCNS1Q96KK3 526 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 TXN2Q99757 166 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 FAM173AQ9BQD7 235 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 ZNF576Q9H609 170 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 TRAV34A0A0B4J273 112 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 LNP1A1A4G5 178 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 ZNF253O75346 499 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 OR5G3P0C626 314 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 TBC1D28Q2M2D7 210 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 CENPWQ5EE01 88 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 STPG3Q8N7X2 389 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 WNT10AQ9GZT5 417 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 LSM4Q9Y4Z0 139 aaKnown RBP13.66□□□□□ -0.22
TRIM39-201ENST00000376656 NTN3O00634 580 aaPredicted RBP13.66□□□□□ -0.22
TRIM39-201ENST00000376656 DUTP33316 252 aaKnown RBP13.66□□□□□ -0.22
TRIM39-201ENST00000376656 AARDQ4LEZ3 155 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 SLC25A40Q8TBP6 338 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 LY96Q9Y6Y9 160 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 TMPRSS3P57727 454 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 LAMTOR2Q9Y2Q5 125 aa13.66□□□□□ -0.22
TRIM39-201ENST00000376656 NBEAQ8NFP9 2946 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 C3orf79P0CE67 100 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 HNRNPA3P51991 378 aaKnown RBP13.65□□□□□ -0.22
TRIM39-201ENST00000376656 RHOBP62745 196 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 CX3CL1P78423 397 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 FAM19A2Q8N3H0 131 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 CDX2Q99626 313 aaPredicted RBP13.65□□□□□ -0.22
TRIM39-201ENST00000376656 ASCL3Q9NQ33 180 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 SAA2-SAA4A0A096LPE2 208 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 SRIP30626 198 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 OR10J3Q5JRS4 329 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 PQLC2Q6ZP29 291 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 Q6ZVH6 145 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 NIT1Q86X76 327 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 TTTY12Q9BZ98 90 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 NPVFQ9HCQ7 196 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 B4GALT7Q9UBV7 327 aa13.65□□□□□ -0.22
TRIM39-201ENST00000376656 ACTL6BO94805 426 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 CRYBB3P26998 211 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 GNG4P50150 75 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 C11orf53Q8IXP5 236 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 ATOH7Q8N100 152 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 OBP2BQ9NPH6 170 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 CCL25O15444 150 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 ZNF324O75467 553 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-201ENST00000376656 GPR12P47775 334 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 MIR17HGQ75NE6 70 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 CT55Q8WUE5 264 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 NANOS1Q8WY41 292 aaKnown RBP13.64□□□□□ -0.23
TRIM39-201ENST00000376656 BMPR1BO00238 502 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 IGHV3-13P01766 116 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 IGHV3-7P01780 117 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 SP1P08047 785 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 GNG10P50151 68 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 MAJINQ3KP22 176 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 MRPL54Q6P161 138 aaKnown RBP13.64□□□□□ -0.23
TRIM39-201ENST00000376656 TMEM251Q8N6I4 163 aa13.64□□□□□ -0.23
TRIM39-201ENST00000376656 HELTA6NFD8 242 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 MT-CO2P00403 227 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 MT-ND6P03923 174 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 CFIP05156 583 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 MPV17P39210 176 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 RELBQ01201 579 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 WDR73Q6P4I2 378 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 TIPARPQ7Z3E1 657 aaKnown RBP13.63□□□□□ -0.23
TRIM39-201ENST00000376656 TUBG2Q9NRH3 451 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 C20orf202A1L168 122 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 DPRXA6NFQ7 191 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 AHRRA9YTQ3 701 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 PRRX1P54821 245 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 ACP7Q6ZNF0 438 aa13.63□□□□□ -0.23
TRIM39-201ENST00000376656 RNASE8Q8TDE3 154 aaKnown RBP13.63□□□□□ -0.23
TRIM39-201ENST00000376656 M0R1X1 148 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 RPL39P5Q59GN2 51 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 TEPPQ6URK8 271 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 TCF19Q9Y242 345 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 IQCF6A8MYZ5 107 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 MMP23AO75900 390 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 GABRA6Q16445 453 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 C15orf65H3BRN8 121 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 IGFBP2P18065 325 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 NTF3P20783 257 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 EDDM3AQ14507 147 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 SSPNQ14714 243 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 PSG5Q15238 335 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 OR52E5Q8NH55 327 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 TSKUQ8WUA8 353 aa13.62□□□□□ -0.23
TRIM39-201ENST00000376656 OR10J4P0C629 311 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms