RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 RND2P52198 227 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 ERVK-16P61578 105 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 OR4A16Q8NH70 328 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 H1FXQ92522 213 aaKnown RBP16.28■□□□□ 0.2
LHX3-202ENST00000371748 RPRMQ9NS64 109 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 TMEM242Q9NWH2 141 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 ELOA3CA0A087WX78 387 aaPredicted RBP16.28■□□□□ 0.2
LHX3-202ENST00000371748 PMS2P5A8MQ11 134 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 LY86O95711 162 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 KIR2DS2P43631 304 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 DEFA6Q01524 100 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.28■□□□□ 0.2
LHX3-202ENST00000371748 OR4S2Q8NH73 311 aa16.28■□□□□ 0.2
LHX3-202ENST00000371748 CIB3Q96Q77 187 aaPredicted RBP16.28■□□□□ 0.2
LHX3-202ENST00000371748 B9A039 149 aa16.27■□□□□ 0.2
LHX3-202ENST00000371748 PHOX2AO14813 284 aa16.27■□□□□ 0.2
LHX3-202ENST00000371748 EFNB3Q15768 340 aa16.27■□□□□ 0.2
LHX3-202ENST00000371748 TMEM140Q9NV12 185 aa16.27■□□□□ 0.2
LHX3-202ENST00000371748 CTSZQ9UBR2 303 aa16.27■□□□□ 0.2
LHX3-202ENST00000371748 TNFRSF13BO14836 293 aaPredicted RBP16.27■□□□□ 0.19
LHX3-202ENST00000371748 BCL2P10415 239 aa16.27■□□□□ 0.19
LHX3-202ENST00000371748 THBS3P49746 956 aa16.27■□□□□ 0.19
LHX3-202ENST00000371748 TMEM200BQ69YZ2 307 aa16.27■□□□□ 0.19
LHX3-202ENST00000371748 SLC25A48Q6ZT89 311 aaKnown RBP16.27■□□□□ 0.19
LHX3-202ENST00000371748 GAL3ST2Q9H3Q3 398 aa16.27■□□□□ 0.19
LHX3-202ENST00000371748 ANKHD1Q8IWZ3 2542 aaKnown RBP16.26■□□□□ 0.19
LHX3-202ENST00000371748 ZFP92A6NM28 416 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 MEF2CQ06413 473 aaPredicted RBP16.26■□□□□ 0.19
LHX3-202ENST00000371748 PNRC1Q12796 327 aaPredicted RBP16.26■□□□□ 0.19
LHX3-202ENST00000371748 LY6DQ14210 128 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 ZNF726P1Q15940 193 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 TAF15Q92804 592 aaKnown RBP eCLIP16.26■□□□□ 0.19
LHX3-202ENST00000371748 ZNF714Q96N38 554 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 IGHV1-69-2A0A0G2JMI3 117 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 FAM90A9PA6NNJ1 464 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 NDUFB3O43676 98 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 RELBQ01201 579 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 SSX7Q7RTT5 188 aa16.26■□□□□ 0.19
LHX3-202ENST00000371748 ZCCHC14Q8WYQ9 949 aaKnown RBP16.26■□□□□ 0.19
LHX3-202ENST00000371748 PSMG3Q9BT73 122 aaPredicted RBP16.26■□□□□ 0.19
LHX3-202ENST00000371748 CLDN34H7C241 214 aa16.25■□□□□ 0.19
LHX3-202ENST00000371748 DVL1O14640 695 aa16.25■□□□□ 0.19
LHX3-202ENST00000371748 OR10P1Q8NGE3 313 aa16.25■□□□□ 0.19
LHX3-202ENST00000371748 CA5BP1Q8WTZ4 195 aa16.25■□□□□ 0.19
LHX3-202ENST00000371748 C14orf144Q96I85 54 aa16.25■□□□□ 0.19
LHX3-202ENST00000371748 RHOVQ96L33 236 aa16.25■□□□□ 0.19
LHX3-202ENST00000371748 FABP4P15090 132 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 GAMTQ14353 236 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 TMEM30BQ3MIR4 351 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 AARDQ4LEZ3 155 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 LRRC10Q5BKY1 277 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 ZNF787Q6DD87 383 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 MUC15Q8N387 334 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 RCC1LQ96I51 464 aaKnown RBP16.24■□□□□ 0.19
LHX3-202ENST00000371748 SSX3Q99909 188 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 SDF2L1Q9HCN8 221 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 LYNX1G3V0Z9 82 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 LYNX1P0DP58 116 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 ELLP55199 621 aaPredicted RBP16.24■□□□□ 0.19
LHX3-202ENST00000371748 C4orf17Q53FE4 359 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 LCN15Q6UWW0 184 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 MBD3L1Q8WWY6 194 aa16.24■□□□□ 0.19
LHX3-202ENST00000371748 PARD6GQ9BYG4 376 aaPredicted RBP16.24■□□□□ 0.19
LHX3-202ENST00000371748 LRBAP50851 2863 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 C15orf62A8K5M9 175 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 SPCS3P61009 180 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 DNLZQ5SXM8 178 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 TMEM147Q9BVK8 224 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 ABCA4P78363 2273 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 TRBV24-1A0A075B6N3 115 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 CT45A6P0DMU7 189 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 CT45A5P0DMU8 189 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 CT45A7P0DMV0 189 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 PLA2G5P39877 138 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 FGF8P55075 233 aaPredicted RBP16.23■□□□□ 0.19
LHX3-202ENST00000371748 ATP6V1FQ16864 119 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 OR4A47Q6IF82 309 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 PINX1Q96BK5 328 aaKnown RBP16.23■□□□□ 0.19
LHX3-202ENST00000371748 ADTRPQ96IZ2 230 aa16.23■□□□□ 0.19
LHX3-202ENST00000371748 LOXP28300 417 aaPredicted RBP16.22■□□□□ 0.19
LHX3-202ENST00000371748 SERF2P84101 59 aa16.22■□□□□ 0.19
LHX3-202ENST00000371748 TFF3Q07654 80 aa16.22■□□□□ 0.19
LHX3-202ENST00000371748 OR10A7Q8NGE5 316 aa16.22■□□□□ 0.19
LHX3-202ENST00000371748 FGF7P21781 194 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 ZNF672Q499Z4 452 aaPredicted RBP16.21■□□□□ 0.19
LHX3-202ENST00000371748 OR52E5Q8NH55 327 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 HEYLQ9NQ87 328 aaPredicted RBP16.21■□□□□ 0.19
LHX3-202ENST00000371748 TPRP12270 2363 aaKnown RBP16.21■□□□□ 0.19
LHX3-202ENST00000371748 TGOLN2O43493 480 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 IFNA10P01566 189 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 IGKV1-16P04430 117 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 PACRGQ96M98 296 aaPredicted RBP16.21■□□□□ 0.19
LHX3-202ENST00000371748 P2RX4Q99571 388 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 HIST1H2BLQ99880 126 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 KAAG1Q9UBP8 84 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 TCF19Q9Y242 345 aa16.21■□□□□ 0.19
LHX3-202ENST00000371748 C15orf61A6NNL5 157 aa16.2■□□□□ 0.18
LHX3-202ENST00000371748 COL8A2P25067 703 aa16.2■□□□□ 0.18
LHX3-202ENST00000371748 VDAC2P45880 294 aaPredicted RBP16.2■□□□□ 0.18
LHX3-202ENST00000371748 CD81P60033 236 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms