RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TMEM167AQ8TBQ9 72 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 SFRP2Q96HF1 295 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 FAM209BQ5JX69 171 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 SCGB3A1Q96QR1 104 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 GPHA2Q96T91 129 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 RBM38Q9H0Z9 239 aaKnown RBP13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 HLA-DQB1P01920 261 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 TMEM42Q69YG0 159 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 FAM90A1Q86YD7 464 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 RARRES2Q99969 163 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 FMC1Q96HJ9 113 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 IGHV3-11P01762 117 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 ZNF688P0C7X2 276 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 ZNF385CQ66K41 422 aaPredicted RBP13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 FAM216BQ8N7L0 139 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 ZNF414Q96IQ9 312 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 NSUN5P1Q3KNT7 163 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 CENPWQ5EE01 88 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 TIAF1O95411 115 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 TCF23Q7RTU1 214 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 SOX21Q9Y651 276 aaPredicted RBP13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 KBTBD11-OT1A0A1B0GTJ5 212 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 DUSP14O95147 198 aaKnown RBP13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 C10orf126Q8N4M7 172 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 POC1AQ8NBT0 407 aa13.3□□□□□ -0.28
NUCKS1-201ENST00000367142 CROCCQ5TZA2 2017 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 C1QL1O75973 258 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 STAG3L3P0CL85 134 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 GGACTQ9BVM4 153 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 ATP5LO75964 103 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 SMIM13P0DJ93 91 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 SMIM10L1P0DMW3 83 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 SMIM10Q96HG1 83 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 NPIPB13A6NJU9 1138 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 CXCL2P19875 107 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 KCNS1Q96KK3 526 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 CELA3AP09093 270 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 NBEAP1P0C6P0 100 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 RFPL3SP0C7P2 107 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 ZNF708P17019 499 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 LINC00312Q9Y6C7 94 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 BIVMQ86UB2 503 aa13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 NXT2Q9NPJ8 142 aaKnown RBP13.29□□□□□ -0.28
NUCKS1-201ENST00000367142 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 TGIF2-C20orf24A0A0A6YYL0 155 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 PEX7O00628 323 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 GPX4P36969 197 aaPredicted RBP13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 DSCR9P59020 149 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 PROB1E7EW31 1015 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 C17orf100A8MU93 164 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 AKAP11Q9UKA4 1901 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 CHCHD2Q9Y6H1 151 aaPredicted RBP13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 SCN9AQ15858 1988 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 EIF3GO75821 320 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■■□□ 18
NUCKS1-201ENST00000367142 KIR3DL3Q8N743 410 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 SSC4DQ8WTU2 575 aa13.28□□□□□ -0.28
NUCKS1-201ENST00000367142 NBR2O15453 112 aa13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 ASPHD2Q6ICH7 369 aa13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 PSMG3Q9BT73 122 aaPredicted RBP13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 MRPL20Q9BYC9 149 aaKnown RBP13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 C5orf66Q9H5L9 145 aa13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 IGKV1D-42A0A075B6H8 117 aa13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 A0A1B0GW15 77 aa13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 C1QTNF9BB2RNN3 333 aa13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 THBDP07204 575 aa13.27□□□□□ -0.28
NUCKS1-201ENST00000367142 C12orf77C9JDV5 145 aa13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 LRTM2Q8N967 370 aa13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 OR5AN1Q8NGI8 311 aa13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 MRPL16Q9NX20 251 aaKnown RBP13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 TRAV8-6A0A0B4J262 113 aa13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 PRSS53Q2L4Q9 553 aa13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 ZNF506Q5JVG8 444 aa13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 RNASEH2CQ8TDP1 164 aaKnown RBP13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 AICDAQ9GZX7 198 aa13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 ZNF250P15622 560 aa13.27□□□□□ -0.29
NUCKS1-201ENST00000367142 CXorf65A6NEN9 183 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 H0YL77 283 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 C2orf68Q2NKX9 166 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 WNT10AQ9GZT5 417 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 TRGV4A0A0C4DH28 118 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 KLF4O43474 513 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 CSRP1P21291 193 aaKnown RBP13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 RND3P61587 244 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 KIAA1644Q3SXP7 199 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 QSER1Q2KHR3 1735 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 ARAP2Q8WZ64 1704 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 WISP3O95389 354 aaPredicted RBP13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 CMC4P56277 68 aaPredicted RBP13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 CTSBP07858 339 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 FAM201AQ5SY85 155 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 CIARTQ8N365 385 aaPredicted RBP13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 OR10J3Q5JRS4 329 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 OR52E5Q8NH55 327 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 CTHRC1Q96CG8 243 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 NPCDR1Q9BY65 106 aa13.26□□□□□ -0.29
NUCKS1-201ENST00000367142 STRCQ7RTU9 1775 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 IGHV1-2P23083 117 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 Q6AWC8 147 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms