RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 XAGE1AQ9HD64 81 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 LYRM2Q9NU23 88 aaPredicted RBP2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 PRNDQ9UKY0 176 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 SLC35A3Q9Y2D2 325 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 ZNF835Q9Y2P0 537 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 DSCAMO60469 2012 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 COL16A1Q07092 1604 aaPredicted RBP2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 LTBP4Q8N2S1 1624 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 NUP160Q12769 1436 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 COL18A1P39060 1754 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 TONSLQ96HA7 1378 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 ABCC12Q96J65 1359 aa2.23□□□□□ -2.05
RNU6-1249P-201ENST00000363237 CACNA1SQ13698 1873 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 HECW1Q76N89 1606 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 TRAV9-1A0A075B6T8 112 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 LOC105371267A0A1B0GV96 52 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 VPS37CA5D8V6 355 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 DPRXA6NFQ7 191 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 C17orf51A8MQB3 221 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 AIPO00170 330 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 PFDN1O60925 122 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 LY6HO94772 140 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 NDUFC2O95298 119 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 CPMP14384 443 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 SERPINB10P48595 397 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 RBM11P57052 281 aaKnown RBP2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 RAB4BP61018 213 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 RHOBP62745 196 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 HBA1P69905 142 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 ZNF660Q6AZW8 331 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 SPATA12Q7Z6I5 190 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 PHF13Q86YI8 300 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 C12orf45Q8N5I9 185 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 MUC7Q8TAX7 377 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 SLC7A6Q92536 515 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 TOMM6Q96B49 74 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 C11orf68Q9H3H3 251 aaKnown RBP2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 BATF3Q9NR55 127 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 NDUFAF1Q9Y375 327 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 SPATA31E1Q6ZUB1 1445 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 YEATS2Q9ULM3 1422 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 REREQ9P2R6 1566 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 TRPM3Q9HCF6 1732 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 DOCK6Q96HP0 2047 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 SLIT3O75094 1523 aa2.22□□□□□ -2.05
RNU6-1249P-201ENST00000363237 TP53BP1Q12888 1972 aaPredicted RBP2.21□□□□□ -2.05
RNU6-1249P-201ENST00000363237 SCN10AQ9Y5Y9 1956 aa2.21□□□□□ -2.05
RNU6-1249P-201ENST00000363237 MAST2Q6P0Q8 1798 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 UBR2Q8IWV8 1755 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGKV2-28A0A075B6P5 120 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TRAV4A0A0B4J268 109 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 COLCA2A8K830 154 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TSTD3H0UI37 97 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 I3L521 148 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 UBFD1O14562 309 aaKnown RBP2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 MFSD11O43934 449 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IFNA10P01566 189 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IFNA7P01567 189 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGKV2D-28P01615 120 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 LGALS1P09382 135 aaKnown RBP2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 NBEAP1P0C6P0 100 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 S100A7P31151 101 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CSN1S1P47710 185 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 FOXA1P55317 472 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 RWDD2BP57060 319 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TAS2R30P59541 319 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 NCALDP61601 193 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 AP1S1P61966 158 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 RPL30P62888 115 aaKnown RBP2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CCL20P78556 96 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 AKR1C1Q04828 323 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 EIF4EBP1Q13541 118 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 RPL22L1Q6P5R6 122 aaKnown RBP2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ZNF322Q6U7Q0 402 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ZNF709Q8N972 641 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CNEP1R1Q8N9A8 125 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 OR13C4Q8NGS5 318 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 C2orf50Q96LR7 162 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 PBDC1Q9BVG4 233 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ACER3Q9NUN7 267 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ASF1BQ9NVP2 202 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TVP23BQ9NYZ1 205 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SS18L2Q9UHA2 77 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 MCTS1Q9ULC4 181 aaKnown RBP2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SSR3Q9UNL2 185 aa2.21□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TRBV19A0A075B6N1 114 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGHV3-73A0A0B4J1V6 119 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 GGTLC3B5MD39 225 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 H7C1C5 153 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 NPYP01303 97 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGHV1-69P01742 117 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST1H2BOP23527 126 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST1H2BBP33778 126 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 LPAR6P43657 344 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 FXYD7P58549 80 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST1H2BDP58876 126 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 LCN6P62502 163 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST1H2BCP62807 126 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 GNG5P63218 68 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms