RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 ZNF429Q86V71 674 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 GRPEL2Q8TAA5 225 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 DCUN1D4Q92564 292 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 HYLS1Q96M11 299 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 CLCC1Q96S66 551 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 ZNF430Q9H8G1 570 aaPredicted RBP17.48■□□□□ 0.39
HOXA4-201ENST00000360046 TMEM14BQ9NUH8 114 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 SIGLEC9Q9Y336 463 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 OR51B2Q9Y5P1 312 aa17.48■□□□□ 0.39
HOXA4-201ENST00000360046 MYOD1P15172 320 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 PJVKQ0ZLH3 352 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 NPBQ8NG41 125 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 SYNGR2O43760 224 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 OPN1MWP04001 364 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 CRYGBP07316 175 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 OPN1MW2P0DN77 364 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 OPN1MW3P0DN78 364 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 AARDQ4LEZ3 155 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 PPP1R27Q86WC6 154 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 PIFOQ8TCI5 191 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 RNF126Q9BV68 326 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 COMMD5Q9GZQ3 224 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 RBKSQ9H477 322 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 FKBP11Q9NYL4 201 aa17.47■□□□□ 0.39
HOXA4-201ENST00000360046 HIVEP1P15822 2718 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 CEBPZOSA8MTT3 80 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 CHST1O43916 411 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 MED6O75586 246 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 NDUFA3O95167 84 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 SLC25A4P12235 298 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 PVALBP20472 110 aaPredicted RBP17.46■□□□□ 0.39
HOXA4-201ENST00000360046 PRSS8Q16651 343 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 ZNF546Q86UE3 836 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 TMEM219Q86XT9 240 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 MMD2Q8IY49 270 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 ZDHHC16Q969W1 377 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 HINT2Q9BX68 163 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 GSX1Q9H4S2 264 aaPredicted RBP17.46■□□□□ 0.39
HOXA4-201ENST00000360046 C1RLQ9NZP8 487 aa17.46■□□□□ 0.39
HOXA4-201ENST00000360046 L7N2F9 121 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 ARPC5O15511 151 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 ACTL6BO94805 426 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 OR2F2O95006 317 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 IAPPP10997 89 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 SPCS3P61009 180 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 GNB1P62873 340 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 VAMP2P63027 116 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 LY6EQ16553 131 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 AANATQ16613 207 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 PLSCR3Q9NRY6 295 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 CACFD1Q9UGQ2 172 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 TCF19Q9Y242 345 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 PLXNB1O43157 2135 aa17.45■□□□□ 0.38
HOXA4-201ENST00000360046 KCNAB3O43448 404 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 HSPE1P61604 102 aaKnown RBP17.44■□□□□ 0.38
HOXA4-201ENST00000360046 TNXAQ16473 311 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 C5orf64Q2M2E5 130 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 OR8H1Q8NGG4 311 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 OR52E5Q8NH55 327 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 ZNF257Q9Y2Q1 563 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 E5RGE8 158 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 FGF2P09038 288 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 MRGPRG-AS1Q2M3A8 158 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 OR5B3Q8NH48 314 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 DTD1Q8TEA8 209 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 TMEM160Q9NX00 188 aa17.44■□□□□ 0.38
HOXA4-201ENST00000360046 TEX50A0A1B0GTY4 177 aa17.43■□□□□ 0.38
HOXA4-201ENST00000360046 LYL1P12980 280 aa17.43■□□□□ 0.38
HOXA4-201ENST00000360046 HOXA1P49639 335 aaPredicted RBP17.43■□□□□ 0.38
HOXA4-201ENST00000360046 IFITM2Q01629 132 aa17.43■□□□□ 0.38
HOXA4-201ENST00000360046 C10orf55Q5SWW7 151 aa17.43■□□□□ 0.38
HOXA4-201ENST00000360046 RAB40CQ96S21 281 aa17.43■□□□□ 0.38
HOXA4-201ENST00000360046 SLC25A33Q9BSK2 321 aa17.43■□□□□ 0.38
HOXA4-201ENST00000360046 FCN1O00602 326 aa17.42■□□□□ 0.38
HOXA4-201ENST00000360046 CA2P00918 260 aa17.42■□□□□ 0.38
HOXA4-201ENST00000360046 INO80EQ8NBZ0 244 aaPredicted RBP17.42■□□□□ 0.38
HOXA4-201ENST00000360046 OR1L8Q8NGR8 309 aa17.42■□□□□ 0.38
HOXA4-201ENST00000360046 RBM14Q96PK6 669 aaKnown RBP17.42■□□□□ 0.38
HOXA4-201ENST00000360046 SLA2Q9H6Q3 261 aa17.42■□□□□ 0.38
HOXA4-201ENST00000360046 ENY2Q9NPA8 101 aa17.42■□□□□ 0.38
HOXA4-201ENST00000360046 MTORP42345 2549 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 HMSDA8MTL9 139 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 H3BP45 60 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 TMEM50AO95807 157 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 IGHV4-59P01825 116 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 MAS1LP35410 378 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 NUP62P37198 522 aaPredicted RBP17.41■□□□□ 0.38
HOXA4-201ENST00000360046 CAV2P51636 162 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 PDLIM3Q53GG5 364 aaPredicted RBP17.41■□□□□ 0.38
HOXA4-201ENST00000360046 TMEM65Q6PI78 240 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 Q8N9W7 124 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 ZNF48Q96MX3 618 aaPredicted RBP17.41■□□□□ 0.38
HOXA4-201ENST00000360046 RASL11BQ9BPW5 248 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 PITPNC1Q9UKF7 332 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 TNFSF18Q9UNG2 199 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 MOB4Q9Y3A3 225 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 HIVEP2P31629 2446 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 CNIH1O95406 144 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 S100A1P23297 94 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 IER3P46695 156 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms