RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SPANXB1Q9NS25 103 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 UBR4Q5T4S7 5183 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CXorf51AA0A1B0GTR3 108 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 TINCRA0A1B0GVN0 87 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 RFXAPO00287 272 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZNF324O75467 553 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CYB5R3P00387 301 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR5H8P0DN80 308 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ALOX5APP20292 161 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 PSMA1P25786 263 aaKnown RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 UQCRFS1P47985 274 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 DIO3P55073 304 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SSBP1Q04837 148 aaKnown RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 AADACL3Q5VUY0 350 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 BLOC1S2Q6QNY1 142 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SAXO1Q8IYX7 474 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZNF615Q8N8J6 731 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 GPR26Q8NDV2 337 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 C1orf109Q9NX04 203 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 RPL36Q9Y3U8 105 aaKnown RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 PXMP4Q9Y6I8 212 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 TRBV20OR9-2A0A075B6H5 130 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGHV1OR21-1A0A087WYE8 117 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 TRBV7-7A0A0K0K1E9 115 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 FGF17O60258 216 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CLDN1O95832 211 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGLV2-14P01704 120 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC2A2P11168 524 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ERGP11308 486 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 AQP1P29972 269 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 DVL1P1P54792 670 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 IL9RQ01113 521 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 PMPCAQ10713 525 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 FAM222AQ5U5X8 452 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CYB5R2Q6BCY4 276 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 TRIM40Q6P9F5 258 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 Q8N2B8 174 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SFXN5Q8TD22 340 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CYYR1Q96J86 154 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SIGMAR1Q99720 223 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC17A9Q9BYT1 436 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 C6orf50Q9HD87 102 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 LRP1Q07954 4544 aaKnown RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGLV5-37A0A075B6J1 123 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 MED19A0JLT2 244 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CD300LBA8K4G0 201 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SPAG7O75391 227 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 UTS2O95399 124 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SRP19P09132 144 aaKnown RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 IFI30P13284 250 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 GTF2F2P13984 249 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 PGAM2P15259 253 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ELK1P19419 428 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CSNK2A2P19784 350 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 MAXP61244 160 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SRPXP78539 464 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 PLCXD2Q0VAA5 305 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 FABP9Q0Z7S8 132 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZNF146Q15072 292 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC9A3R2Q15599 337 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 NRF1Q16656 503 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 KRTAP19-4Q3LI73 84 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZFP69Q49AA0 526 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR10J3Q5JRS4 329 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 VN1R4Q7Z5H5 301 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 UBAC2Q8NBM4 344 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 MBD3L1Q8WWY6 194 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CCDC126Q96EE4 140 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC25A44Q96H78 314 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CDX2Q99626 313 aaPredicted RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ATP5SQ99766 215 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 CNPY3Q9BT09 278 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 SFXN3Q9BWM7 321 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 ULBP1Q9BZM6 244 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 LIME1Q9H400 295 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 TMEM138Q9NPI0 162 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 LSM7Q9UK45 103 aaKnown RBP1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 GOLT1BQ9Y3E0 138 aa1.25□□□□□ -2.21
SMARCAD1-202ENST00000359052 BAHCC1Q9P281 2608 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 A0A0J9YXV3 536 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 EXOC1LA0A1B0GW35 172 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 DHRS12A0PJE2 317 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 PIRO00625 290 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 SOCS3O14543 225 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 BCL2L11O43521 198 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZNF354AO60765 605 aaPredicted RBP1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 HYPMO75409 117 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGHV3-23P01764 117 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 LGALS2P05162 132 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 DRD3P35462 400 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 RAB5CP51148 216 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 UBE2D3P61077 147 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 RPS13P62277 151 aaKnown RBP1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 UBE2D2P62837 147 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 BTN3A2P78410 334 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 CDK5R1Q15078 307 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 RHEBQ15382 184 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 ARHGAP11BQ3KRB8 267 aa1.24□□□□□ -2.21
SMARCAD1-202ENST00000359052 Q6ZRG5 221 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms