RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 WBP2Q969T9 261 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 HDHD3Q9BSH5 251 aaPredicted RBP4.32□□□□□ -1.72
SKP1-202ENST00000353411 SFXN3Q9BWM7 321 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 TMEM140Q9NV12 185 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 WNT16Q9UBV4 365 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 LY96Q9Y6Y9 160 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 FAM208BQ5VWN6 2430 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 TRAV38-1A0A0B4J264 116 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 AHRRA9YTQ3 701 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
SKP1-202ENST00000353411 SNAI2O43623 268 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 IFI6P09912 130 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 CRYBA4P53673 196 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 C10orf113Q5VZT2 155 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 DEFB123Q8N688 67 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 TPRX1Q8N7U7 411 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 TMEM56-RWDD3S4R434 201 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 DENND4CQ5VZ89 1909 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 LRRC30A6NM36 301 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 H0YIG0 161 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 HOXB2P14652 356 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 KIR2DL1P43626 348 aaPredicted RBP4.32□□□□□ -1.72
SKP1-202ENST00000353411 GNB2P62879 340 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 BHLHA9Q7RTU4 235 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 KLF12Q9Y4X4 402 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 CCDC168Q8NDH2 2452 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 E9PQ18 207 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 PFN1P07737 140 aaKnown RBP4.32□□□□□ -1.72
SKP1-202ENST00000353411 GNG3P63215 75 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 OR1L1Q8NH94 360 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 MYO18BQ8IUG5 2567 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 A0A087X0K7 114 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 A0A1W2PR80 420 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 hADV38S2A0JD32 116 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 C9orf172C9J069 976 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 CDKN1AP38936 164 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 SS18L2Q9UHA2 77 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 G3V4G9 280 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 ATP5LO75964 103 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 GABRG2P18507 467 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 UCP1P25874 307 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 KLRB1Q12918 225 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 PAXXQ9BUH6 204 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 SYS1-DBNDD2H3BUS1 97 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 AREGP15514 252 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 ZP4Q12836 540 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 TBC1D28Q2M2D7 210 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 Q6ZWC4 215 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 BADQ92934 168 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 NAT6Q93015 286 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 WFDC1Q9HC57 220 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 AMMECR1Q9Y4X0 333 aaPredicted RBP4.32□□□□□ -1.72
SKP1-202ENST00000353411 DSCAMO60469 2012 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 C9JCJ5 164 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 GCHFRP30047 84 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 OPRK1P41145 380 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 P2RY2P41231 377 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 TMEM177Q53S58 311 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 LINC01590Q5TEZ4 76 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 Q6AWC8 147 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 ABHD14AQ9BUJ0 271 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 MRPL32Q9BYC8 188 aaKnown RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 DHHO43323 396 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 PVRP15151 417 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 FAM53BQ14153 422 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 ZIC1Q15915 447 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 FNDC7Q5VTL7 733 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A2PQ658T7 463 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 DEFB125Q8N687 156 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 VN1R2Q8NFZ6 395 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 BAHD1Q8TBE0 780 aaPredicted RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 ZPLD1Q8TCW7 415 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 SP7Q8TDD2 431 aaPredicted RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 TMEM230Q96A57 120 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 SF3B5Q9BWJ5 86 aaKnown RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 UFC1Q9Y3C8 167 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 IGLC7A0M8Q6 106 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 UNC119Q13432 240 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 BHLHA15Q7RTS1 189 aaPredicted RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 WFDC8Q8IUA0 241 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 A0A1W2PPM0 123 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 PGLYRP1O75594 196 aaPredicted RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 CDAP32320 146 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 IZUMO4Q1ZYL8 232 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 GCSAMLQ5JQS6 135 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 BVES-AS1Q5T3Y7 98 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 BMPERQ8N8U9 685 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 VOPP1Q96AW1 172 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 PGLYRP4Q96LB8 373 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 SMPXQ9UHP9 88 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 TRAV26-1A0A087WT03 109 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 A0A1W2PQM1 296 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 RPS16P62249 146 aaKnown RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 OR4C3Q8NH37 302 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 WBP1Q96G27 269 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 WFDC6Q9BQY6 131 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 TM2D1Q9BX74 207 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 IGFBP3P17936 291 aaPredicted RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 CFPP27918 469 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms