RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 A0A1B0GX30 115 aa13.62□□□□□ -0.23
SAMM50-201ENST00000350028 H3BQ15 152 aa13.62□□□□□ -0.23
SAMM50-201ENST00000350028 IFNA4P05014 189 aa13.62□□□□□ -0.23
SAMM50-201ENST00000350028 TAGLN2P37802 199 aaKnown RBP13.62□□□□□ -0.23
SAMM50-201ENST00000350028 PPOXP50336 477 aa13.62□□□□□ -0.23
SAMM50-201ENST00000350028 FLI1Q01543 452 aaPredicted RBP13.62□□□□□ -0.23
SAMM50-201ENST00000350028 HNF4GQ14541 408 aa13.62□□□□□ -0.23
SAMM50-201ENST00000350028 C20orf24Q9BUV8 137 aa13.62□□□□□ -0.23
SAMM50-201ENST00000350028 RELNP78509 3460 aa13.62□□□□□ -0.23
SAMM50-201ENST00000350028 IGKV1-16P04430 117 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 FBP1P09467 338 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 NPY1RP25929 384 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 AKR1C3P42330 323 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 ATP5IP56385 69 aaPredicted RBP13.61□□□□□ -0.23
SAMM50-201ENST00000350028 TMEM177Q53S58 311 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 FAM122CQ6P4D5 195 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 SLC24A4Q8NFF2 622 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 OR10X1Q8NGY0 326 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 OR9G1Q8NH87 305 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 TMEM170AQ8WVE7 144 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 ZFYVE26Q68DK2 2539 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 POLEQ07864 2286 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 SMCO3A2RU48 225 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 SRRM4A7MD48 611 aaKnown RBP13.61□□□□□ -0.23
SAMM50-201ENST00000350028 H0YJW9 148 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 COL8A2P25067 703 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 CEBPGP53567 150 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 PRCDQ00LT1 54 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 Q8N7P7 452 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 TVP23CQ96ET8 276 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 SLC25A22Q9H936 323 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 NPVFQ9HCQ7 196 aa13.61□□□□□ -0.23
SAMM50-201ENST00000350028 RALYQ9UKM9 306 aaKnown RBP13.61□□□□□ -0.23
SAMM50-201ENST00000350028 NDUFS6O75380 124 aaKnown RBP13.6□□□□□ -0.23
SAMM50-201ENST00000350028 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 OPRK1P41145 380 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 ZNF137PP52743 207 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 CDSNQ15517 529 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 AVPI1Q5T686 147 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 TREML4Q6UXN2 200 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 SLC35E3Q7Z769 313 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 PDPNQ86YL7 162 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 OR5B3Q8NH48 314 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 ST6GALNAC6Q969X2 333 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 NIPSNAP3BQ9BS92 247 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 PLEKHA3Q9HB20 300 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 MLXQ9UH92 298 aa13.6□□□□□ -0.23
SAMM50-201ENST00000350028 CACNA1BQ00975 2339 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 TEX50A0A1B0GTY4 177 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 FNDC10F2Z333 226 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 IGHV2-70P01814 119 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 SAA1P0DJI8 122 aaPredicted RBP13.59□□□□□ -0.23
SAMM50-201ENST00000350028 FOLR2P14207 255 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 IL3RAP26951 378 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 RAB24Q969Q5 203 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 FLYWCH2Q96CP2 140 aaKnown RBP13.59□□□□□ -0.23
SAMM50-201ENST00000350028 HARBI1Q96MB7 349 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 PCGF1Q9BSM1 259 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 KCNIP2Q9NS61 270 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 SEC14L6B5MCN3 397 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 CA2P00918 260 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 CDC34P49427 236 aaPredicted RBP13.59□□□□□ -0.23
SAMM50-201ENST00000350028 FAM90A2PQ658T7 463 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 OR4A5Q8NH83 315 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 TNFRSF14Q92956 283 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 NEIL1Q96FI4 390 aaPredicted RBP13.59□□□□□ -0.23
SAMM50-201ENST00000350028 HINT2Q9BX68 163 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 TMEM133Q9H2Q1 129 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 MANBALQ9NQG1 85 aa13.59□□□□□ -0.23
SAMM50-201ENST00000350028 A0A087WWC5 75 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 A0A1W2PPH5 198 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 LYNX1G3V0Z9 82 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 MT-ND4LP03901 98 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 CRYBA1P05813 215 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 LYNX1P0DP58 116 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 MYOD1P15172 320 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 PSMB3P49720 205 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 TMEM249Q2WGJ8 235 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 RNF212Q495C1 297 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 C11orf42Q8N5U0 333 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 OR4C13Q8NGP0 309 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 VSTM2AQ8TAG5 236 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 HIST1H2BAQ96A08 127 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 RAB1BQ9H0U4 201 aa13.58□□□□□ -0.24
SAMM50-201ENST00000350028 USF1P22415 310 aaPredicted RBP13.57□□□□□ -0.24
SAMM50-201ENST00000350028 MC5RP33032 325 aa13.57□□□□□ -0.24
SAMM50-201ENST00000350028 ZNF841Q6ZN19 808 aa13.57□□□□□ -0.24
SAMM50-201ENST00000350028 TGIF2LXQ8IUE1 241 aa13.57□□□□□ -0.24
SAMM50-201ENST00000350028 RAB1CQ92928 201 aa13.57□□□□□ -0.24
SAMM50-201ENST00000350028 MGST2Q99735 147 aa13.57□□□□□ -0.24
SAMM50-201ENST00000350028 GGTLC1Q9BX51 225 aa13.57□□□□□ -0.24
SAMM50-201ENST00000350028 WASHC3Q9Y3C0 194 aa13.57□□□□□ -0.24
SAMM50-201ENST00000350028 LSM4Q9Y4Z0 139 aaKnown RBP13.57□□□□□ -0.24
SAMM50-201ENST00000350028 B4DEV8 164 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 REG1BP48304 166 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 RAB13P51153 203 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 PNRC1Q12796 327 aaPredicted RBP13.56□□□□□ -0.24
SAMM50-201ENST00000350028 RAB31Q13636 194 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 C2orf83Q53S99 150 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms