RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 LPAR6P43657 344 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 SSBP2P81877 361 aaPredicted RBP8.8□□□□□ -1
SLC28A1-202ENST00000338602 KIAA0141Q14154 515 aaPredicted RBP8.8□□□□□ -1
SLC28A1-202ENST00000338602 POU2AF1Q16633 256 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 MRGPRG-AS1Q2M3A8 158 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 DEFB136Q30KP8 78 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 BEAN1Q3B7T3 259 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 PYDC2Q56P42 97 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 TBC1D26Q86UD7 250 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 CCDC71LQ8N9Z2 235 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 CASTOR1Q8WTX7 329 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 USMG5Q96IX5 58 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 DUX3Q96PT4 197 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 FYTTD1Q96QD9 318 aaKnown RBP8.8□□□□□ -1
SLC28A1-202ENST00000338602 COMMD5Q9GZQ3 224 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 SRRQ9GZT4 340 aa8.8□□□□□ -1
SLC28A1-202ENST00000338602 LINC01619G3V211 115 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 UPK2O00526 184 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 ATG12O94817 140 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 HSPB1P04792 205 aaKnown RBP8.79□□□□□ -1
SLC28A1-202ENST00000338602 SERPINE2P07093 398 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 FGF2P09038 288 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 APELAP0DMC3 54 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 PTBP1P26599 531 aaKnown RBP eCLIP8.79□□□□□ -12e-7■■■■□ 19.9
SLC28A1-202ENST00000338602 KPRPQ5T749 579 aaPredicted RBP8.79□□□□□ -1
SLC28A1-202ENST00000338602 REC114Q7Z4M0 266 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 LHFPL1Q86WI0 220 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 CADM3Q8N126 398 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 TTC9CQ8N5M4 171 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 SLC2A9Q9NRM0 540 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 TMEM140Q9NV12 185 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 FKBP11Q9NYL4 201 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 COPZ2Q9P299 210 aa8.79□□□□□ -1
SLC28A1-202ENST00000338602 MARCH11A6NNE9 402 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 CYB5BO43169 146 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 UPK1BO75841 260 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 KRASP01116 189 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 IGHV3-11P01762 117 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 RPA2P15927 270 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 FAUP35544 74 aaKnown RBP8.78□□□□□ -1
SLC28A1-202ENST00000338602 PIGPP57054 158 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 AP3S2P59780 193 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 RND3P61587 244 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 FHL3Q13643 280 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 BAK1Q16611 211 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 FAM209BQ5JX69 171 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 C9orf66Q5T8R8 295 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 ASPHD1Q5U4P2 390 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 THOC7Q6I9Y2 204 aaKnown RBP8.78□□□□□ -1
SLC28A1-202ENST00000338602 GDPD1Q8N9F7 314 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 ADAD2Q8NCV1 583 aaKnown RBP8.78□□□□□ -1
SLC28A1-202ENST00000338602 SCGB3A2Q96PL1 93 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 PRRT1Q99946 306 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 SRSF8Q9BRL6 282 aaKnown RBP8.78□□□□□ -1
SLC28A1-202ENST00000338602 RANGRFQ9HD47 186 aaPredicted RBP8.78□□□□□ -1
SLC28A1-202ENST00000338602 PALMDQ9NP74 551 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 SCP2D1Q9UJQ7 156 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 C14orf166Q9Y224 244 aaKnown RBP8.78□□□□□ -1
SLC28A1-202ENST00000338602 ZNF257Q9Y2Q1 563 aa8.78□□□□□ -1
SLC28A1-202ENST00000338602 TNCP24821 2201 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 ANKRD20A5PA0PJZ0 165 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 FAM223BA6NKX1 122 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 B3GALNT1O75752 331 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 ZNF735P0CB33 412 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 DEFA4P12838 97 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 ZP3P21754 424 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 SURF2Q15527 256 aaPredicted RBP8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 ZNF585BQ52M93 769 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 C10orf55Q5SWW7 151 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 HSD17B13Q7Z5P4 300 aaPredicted RBP8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 FAM223AQ8IWN6 122 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 OR4D10Q8NGI6 311 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 THAP7Q9BT49 309 aaPredicted RBP8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 CCDC32Q9BV29 185 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 PRNDQ9UKY0 176 aa8.77□□□□□ -1.01
SLC28A1-202ENST00000338602 HMX3A6NHT5 357 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 NPIPB5A8MRT5 1133 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 SEC14L6B5MCN3 397 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 H0Y980 276 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 CTSDP07339 412 aaPredicted RBP8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 IL6RP08887 468 aaPredicted RBP8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 TRAPPC2P0DI81 140 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 TRAPPC2BP0DI82 140 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 IL7P13232 177 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 HIST1H1BP16401 226 aaKnown RBP8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 PI3P19957 117 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 G6PCP35575 357 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 RHOGP84095 191 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 TATDN3Q17R31 274 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 H2BFWTQ7Z2G1 175 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 Q8N402 240 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 NECAP1Q8NC96 275 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 OR4C16Q8NGL9 310 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 OR1L8Q8NGR8 309 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 OR13C8Q8NGS7 320 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 MARCH1Q8TCQ1 289 aa8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 QTRT1Q9BXR0 403 aaKnown RBP8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 ALX4Q9H161 411 aaPredicted RBP8.76□□□□□ -1.01
SLC28A1-202ENST00000338602 MCUBQ9NWR8 336 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 410.8 ms