RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ESDP10768 282 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 PRTN3P24158 256 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 PRSS53Q2L4Q9 553 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 DRAM1Q8N682 238 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 LHX9Q9NQ69 397 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 TNFSF13O75888 250 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 UCP2P55851 309 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 SLC25A47Q6Q0C1 308 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 FMC1Q96HJ9 113 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 RNASE7Q9H1E1 156 aaKnown RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 CD160O95971 181 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 DRD3P35462 400 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 ASPHD2Q6ICH7 369 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 FAM159AQ6UWV7 190 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 KCNK17Q96T54 332 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 HIGD1CA8MV81 97 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 C1QTNF9P0C862 333 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 IGFBP2P18065 325 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 HEPN1Q6WQI6 88 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 SELENOKQ9Y6D0 94 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 CACNA1CQ13936 2221 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 TMEM14DPA8MWL7 114 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 H3BRM9 83 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 CEACAM1P13688 526 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 TSPOP30536 169 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 CCL8P80075 99 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 PSMG4Q5JS54 123 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 ORMDL3Q8N138 153 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 GATAD1Q8WUU5 269 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 IGHV3OR16-10A0A075B7F0 116 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 LHFPL6Q9Y693 200 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 SHISA3A0PJX4 238 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 WISP3O95389 354 aaPredicted RBP8.35□□□□□ -1.07
COL4A6-201ENST00000334504 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 RAX2Q96IS3 184 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 MS4A5Q9H3V2 200 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 TRAV5A0A0B4J249 113 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 LOC101059948A0A1B0GTJ6 334 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 NGFRP08138 427 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 SEC11AP67812 179 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 TEX45Q8NA69 505 aa8.35□□□□□ -1.07
COL4A6-201ENST00000334504 TRAV2A0A0B4J234 112 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 IGKV3-20P01619 116 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 FAM106CPP0CH98 169 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 HSD52Q0P140 79 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 OR10J3Q5JRS4 329 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 RTBDNQ9BSG5 229 aaPredicted RBP8.34□□□□□ -1.07
COL4A6-201ENST00000334504 A0A0J9YW62 118 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 AMBPP02760 352 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 PF4P02776 101 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 CNTFRP26992 372 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 SRSF6Q13247 344 aaKnown RBP8.34□□□□□ -1.07
COL4A6-201ENST00000334504 TMEM92Q6UXU6 159 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 MIR17HGQ75NE6 70 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 C1QL4Q86Z23 238 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 TMEM171Q8WVE6 324 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 APOBEC4Q8WW27 367 aaKnown RBP8.34□□□□□ -1.07
COL4A6-201ENST00000334504 VKORC1Q9BQB6 163 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 ASIPP42127 132 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 ITLN1Q8WWA0 313 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 TNFRSF18Q9Y5U5 241 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 ODAMA1E959 279 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 ZNF815PA8K554 130 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 PATE3B3GLJ2 98 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 NPIPB4C9JG80 1138 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 NBEAP1P0C6P0 100 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 A0A1B0GW15 77 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 DPM2O94777 84 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 THY1P04216 161 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 ADRA2AP08913 450 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 TMEM249Q2WGJ8 235 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
COL4A6-201ENST00000334504 CXCL1P09341 107 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 SAA1P0DJI8 122 aaPredicted RBP8.33□□□□□ -1.08
COL4A6-201ENST00000334504 PMS2CLQ68D20 193 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 RPP25Q9BUL9 199 aaKnown RBP8.33□□□□□ -1.08
COL4A6-201ENST00000334504 EDA2RQ9HAV5 297 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 JPT1Q9UK76 154 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 EVPLQ92817 2033 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 IGKV3D-20A0A0C4DH25 116 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 CEACAM4O75871 244 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 SSBP2P81877 361 aaPredicted RBP8.33□□□□□ -1.08
COL4A6-201ENST00000334504 ATP5G2Q06055 141 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 DUX5Q96PT3 197 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV3-66A0A0C4DH42 116 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 COQ2Q96H96 371 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 ST20Q9HBF5 79 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 PKD1L3Q7Z443 1732 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 A0A0G2JLM5 398 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 COLCA2A8K830 154 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV3-23P01764 117 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 SAXO1Q8IYX7 474 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 FER1L6-AS1Q8NA97 138 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 SLC25A15Q9Y619 301 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 FHL5Q5TD97 284 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 ASCL4Q6XD76 172 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 JMJD8Q96S16 334 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 TTC3P53804 2025 aa8.33□□□□□ -1.08
COL4A6-201ENST00000334504 PSG1P11464 419 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms