RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 OR4A16Q8NH70 328 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 PHB2Q99623 299 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 COMMD5Q9GZQ3 224 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 ALX4Q9H161 411 aaPredicted RBP19.25■□□□□ 0.67
HOXC9-201ENST00000303450 TENM1Q9UKZ4 2725 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 PIGBOS1A0A0B4J2F0 54 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 C9orf170A2RU37 121 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 MSGN1A6NI15 193 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 FGF2P09038 288 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 RPL27AP46776 148 aaKnown RBP19.24■□□□□ 0.67
HOXC9-201ENST00000303450 CRIP2P52943 208 aaPredicted RBP19.24■□□□□ 0.67
HOXC9-201ENST00000303450 RAB25P57735 213 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 DHRS2Q13268 280 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 C10orf55Q5SWW7 151 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 UNQ5815/PRO19632Q6UWF5 114 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 PRNDQ9UKY0 176 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 STAB1Q9NY15 2570 aa19.24■□□□□ 0.67
HOXC9-201ENST00000303450 RBMXL2O75526 392 aaKnown RBP19.23■□□□□ 0.67
HOXC9-201ENST00000303450 OPN1MWP04001 364 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 OPN1MW2P0DN77 364 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 OPN1MW3P0DN78 364 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 IZUMO4Q1ZYL8 232 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 ANKRD55Q3KP44 614 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 AKIRIN2Q53H80 203 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 PLET1Q6UQ28 207 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 C10orf99Q6UWK7 81 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 LYG2Q86SG7 212 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 SLC35G3Q8N808 338 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 WIPF2Q8TF74 440 aaPredicted RBP19.23■□□□□ 0.67
HOXC9-201ENST00000303450 SPIN2AQ99865 258 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 SPIN2BQ9BPZ2 258 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 ZNF747Q9BV97 191 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 FKBP11Q9NYL4 201 aa19.23■□□□□ 0.67
HOXC9-201ENST00000303450 MYOD1P15172 320 aa19.22■□□□□ 0.67
HOXC9-201ENST00000303450 OR2B8PP59922 312 aa19.22■□□□□ 0.67
HOXC9-201ENST00000303450 DCTN2Q13561 401 aaKnown RBP19.22■□□□□ 0.67
HOXC9-201ENST00000303450 FAM219AQ8IW50 185 aa19.22■□□□□ 0.67
HOXC9-201ENST00000303450 FYTTD1Q96QD9 318 aaKnown RBP19.22■□□□□ 0.67
HOXC9-201ENST00000303450 A0A0B4J2A0 478 aa19.21■□□□□ 0.67
HOXC9-201ENST00000303450 P0C879 139 aa19.21■□□□□ 0.67
HOXC9-201ENST00000303450 KRTAP10-3P60369 221 aa19.21■□□□□ 0.67
HOXC9-201ENST00000303450 C11orf44Q8N8P7 122 aa19.21■□□□□ 0.67
HOXC9-201ENST00000303450 OR4X2Q8NGF9 303 aa19.21■□□□□ 0.67
HOXC9-201ENST00000303450 LSM10Q969L4 123 aaKnown RBP19.21■□□□□ 0.67
HOXC9-201ENST00000303450 TMEM68Q96MH6 324 aa19.21■□□□□ 0.67
HOXC9-201ENST00000303450 SHPKQ9UHJ6 478 aa19.21■□□□□ 0.67
HOXC9-201ENST00000303450 OR51B2Q9Y5P1 312 aa19.21■□□□□ 0.67
HOXC9-201ENST00000303450 A0A0G2JRQ6 117 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 C15orf61A6NNL5 157 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 APELAP0DMC3 54 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 CFHR3Q02985 330 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 SRSF4Q08170 494 aaKnown RBP19.2■□□□□ 0.66
HOXC9-201ENST00000303450 TEX38Q6PEX7 206 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 LYZL2Q7Z4W2 148 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 LRTM2Q8N967 370 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 A0A1W2PN81 502 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 E7EUB6 86 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 FBXO24O75426 580 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 DUS4LO95620 317 aaKnown RBP19.2■□□□□ 0.66
HOXC9-201ENST00000303450 PPIFP30405 207 aaKnown RBP19.2■□□□□ 0.66
HOXC9-201ENST00000303450 CHRNA7P36544 502 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 MECP2P51608 486 aaKnown RBP19.2■□□□□ 0.66
HOXC9-201ENST00000303450 C19orf54Q5BKX5 351 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 COMMD1Q8N668 190 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 MINDY2Q8NBR6 621 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 OR1L8Q8NGR8 309 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 COQ8AQ8NI60 647 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 TMEM14BQ9NUH8 114 aa19.2■□□□□ 0.66
HOXC9-201ENST00000303450 FOXA2Q9Y261 457 aaPredicted RBP19.2■□□□□ 0.66
HOXC9-201ENST00000303450 A0A0B4J293 547 aa19.19■□□□□ 0.66
HOXC9-201ENST00000303450 TEX50A0A1B0GTY4 177 aa19.19■□□□□ 0.66
HOXC9-201ENST00000303450 DUXBA0A1W2PPF3 345 aa19.19■□□□□ 0.66
HOXC9-201ENST00000303450 CD28P10747 220 aa19.19■□□□□ 0.66
HOXC9-201ENST00000303450 OR52B4Q8NGK2 314 aa19.19■□□□□ 0.66
HOXC9-201ENST00000303450 GPR146Q96CH1 333 aa19.19■□□□□ 0.66
HOXC9-201ENST00000303450 QTRT1Q9BXR0 403 aaKnown RBP19.19■□□□□ 0.66
HOXC9-201ENST00000303450 HMX3A6NHT5 357 aa19.18■□□□□ 0.66
HOXC9-201ENST00000303450 DBX1A6NMT0 343 aa19.18■□□□□ 0.66
HOXC9-201ENST00000303450 PTTG1O95997 202 aa19.18■□□□□ 0.66
HOXC9-201ENST00000303450 IGHG4P01861 327 aa19.18■□□□□ 0.66
HOXC9-201ENST00000303450 ASPHD1Q5U4P2 390 aa19.18■□□□□ 0.66
HOXC9-201ENST00000303450 OR5B3Q8NH48 314 aa19.18■□□□□ 0.66
HOXC9-201ENST00000303450 CITED1Q99966 193 aa19.18■□□□□ 0.66
HOXC9-201ENST00000303450 HINT2Q9BX68 163 aa19.18■□□□□ 0.66
HOXC9-201ENST00000303450 TET2Q6N021 2002 aaPredicted RBP19.17■□□□□ 0.66
HOXC9-201ENST00000303450 TEX22C9J3V5 150 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 INMT-MINDY4F8WBC2 141 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 TRAPPC2P0DI81 140 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 TRAPPC2BP0DI82 140 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 SHISA2Q6UWI4 295 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 Q6ZRM9 215 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 OR5T1Q8NG75 326 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 OR5M8Q8NGP6 311 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 SPATA3Q8NHX4 192 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 SEC22CQ9BRL7 303 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 CACNG5Q9UF02 275 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 ZNF257Q9Y2Q1 563 aa19.17■□□□□ 0.66
HOXC9-201ENST00000303450 A0A1B0GW64 132 aa19.16■□□□□ 0.66
HOXC9-201ENST00000303450 FOXE3Q13461 319 aa19.16■□□□□ 0.66
HOXC9-201ENST00000303450 NMSQ5H8A3 153 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms