RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 MESP1Q9BRJ9 268 aa16.29■□□□□ 0.2
TSR1-201ENST00000301364 KIR2DL2P43627 348 aaPredicted RBP16.28■□□□□ 0.2
TSR1-201ENST00000301364 ZFP36L1Q07352 338 aaKnown RBP16.28■□□□□ 0.2
TSR1-201ENST00000301364 C12orf54Q6X4T0 127 aa16.28■□□□□ 0.2
TSR1-201ENST00000301364 ZNF497Q6ZNH5 498 aa16.28■□□□□ 0.2
TSR1-201ENST00000301364 TRAV24A0A0B4J272 114 aa16.28■□□□□ 0.2
TSR1-201ENST00000301364 HERVK_113P61574 105 aa16.28■□□□□ 0.2
TSR1-201ENST00000301364 QRFPP83859 136 aa16.28■□□□□ 0.2
TSR1-201ENST00000301364 ECSCRQ19T08 205 aa16.28■□□□□ 0.2
TSR1-201ENST00000301364 MRPL37Q9BZE1 423 aaKnown RBP16.28■□□□□ 0.2
TSR1-201ENST00000301364 IFI27L2Q9H2X8 130 aa16.28■□□□□ 0.2
TSR1-201ENST00000301364 RPL23P62829 140 aaKnown RBP16.28■□□□□ 0.2
TSR1-201ENST00000301364 ATG101Q9BSB4 218 aa16.28■□□□□ 0.2
TSR1-201ENST00000301364 IGHV1-2P23083 117 aa16.27■□□□□ 0.2
TSR1-201ENST00000301364 OR4A47Q6IF82 309 aa16.27■□□□□ 0.2
TSR1-201ENST00000301364 HILPDAQ9Y5L2 63 aa16.27■□□□□ 0.2
TSR1-201ENST00000301364 IGKV3D-15A0A087WSY6 115 aa16.27■□□□□ 0.19
TSR1-201ENST00000301364 RPL13AP40429 203 aaKnown RBP16.27■□□□□ 0.19
TSR1-201ENST00000301364 PGLYRP4Q96LB8 373 aa16.27■□□□□ 0.19
TSR1-201ENST00000301364 COTL1Q14019 142 aa16.27■□□□□ 0.19
TSR1-201ENST00000301364 ZNF324BQ6AW86 544 aaPredicted RBP16.27■□□□□ 0.19
TSR1-201ENST00000301364 RTTNQ86VV8 2226 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 KBTBD11-OT1A0A1B0GTJ5 212 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 MFAP4P55083 255 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 SPANXN1Q5VSR9 72 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 MBD3L1Q8WWY6 194 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 CBLN4Q9NTU7 201 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 IGHV2OR16-5A0A0B4J2B6 119 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 UBE2CO00762 179 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 TNFSF10P50591 281 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 PNRC2Q9NPJ4 139 aaKnown RBP16.26■□□□□ 0.19
TSR1-201ENST00000301364 DEPPQ9NTK1 212 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 TCF21O43680 179 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 UCNP55089 124 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 SCGB1D4Q6XE38 83 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 TWIST1Q15672 202 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 DNM1P46Q6ZS02 220 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 WFIKKN1Q96NZ8 548 aa16.26■□□□□ 0.19
TSR1-201ENST00000301364 COLCA2A8K830 154 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 CGAP01215 116 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 ATP5G3P48201 142 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 RPS20P60866 119 aaKnown RBP16.25■□□□□ 0.19
TSR1-201ENST00000301364 CACNG8Q8WXS5 425 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 LOC389332A0A1B0GUA5 103 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 A0A1B0GW64 132 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 RPL24P83731 157 aaKnown RBP16.25■□□□□ 0.19
TSR1-201ENST00000301364 SEMA5BQ9P283 1151 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 MYLKQ15746 1914 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 PPIAL4CA0A0B4J2A2 164 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 PPIAL4GP0DN37 164 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 IGFBP2P18065 325 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 CLEC7AQ9BXN2 247 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 RSPO3Q9BXY4 272 aaPredicted RBP16.25■□□□□ 0.19
TSR1-201ENST00000301364 PTPRDP23468 1912 aa16.25■□□□□ 0.19
TSR1-201ENST00000301364 THSD7BQ9C0I4 1608 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 FAM106CPP0CH98 169 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 CKS2P33552 79 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 CCL20P78556 96 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 TMEM78Q5T7P6 136 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 ELOVL5Q9NYP7 299 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 TP53BP1Q12888 1972 aaPredicted RBP16.24■□□□□ 0.19
TSR1-201ENST00000301364 YPEL1O60688 119 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 HINT1P49773 126 aaPredicted RBP16.24■□□□□ 0.19
TSR1-201ENST00000301364 YPEL2Q96QA6 119 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 FCGR2BP31994 310 aaPredicted RBP16.24■□□□□ 0.19
TSR1-201ENST00000301364 HEPN1Q6WQI6 88 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 FGFBP3Q8TAT2 258 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 UBTD1Q9HAC8 227 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 AUP1Q9Y679 476 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 SCO2A0A1W2PP80 73 aa16.24■□□□□ 0.19
TSR1-201ENST00000301364 SCN8AQ9UQD0 1980 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 ASXL3Q9C0F0 2248 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 NTN3O00634 580 aaPredicted RBP16.23■□□□□ 0.19
TSR1-201ENST00000301364 RBFOX2O43251 390 aaKnown RBP eCLIP16.23■□□□□ 0.19
TSR1-201ENST00000301364 RPL7P18124 248 aaKnown RBP16.23■□□□□ 0.19
TSR1-201ENST00000301364 PSG9Q00887 426 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 SLC25A34Q6PIV7 304 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 SRSF12Q8WXF0 261 aaKnown RBP16.23■□□□□ 0.19
TSR1-201ENST00000301364 TMEM242Q9NWH2 141 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 ICE1Q9Y2F5 2266 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 MGAMO43451 1857 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 K7ERU9 68 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 CELA3BP08861 270 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 LINC00305Q7Z4B0 112 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 GVINP1Q7Z2Y8 2422 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 DCTN5Q9BTE1 182 aa16.23■□□□□ 0.19
TSR1-201ENST00000301364 SSBP3Q9BWW4 388 aaPredicted RBP16.23■□□□□ 0.19
TSR1-201ENST00000301364 RALYQ9UKM9 306 aaKnown RBP16.23■□□□□ 0.19
TSR1-201ENST00000301364 CEP250Q9BV73 2442 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 IGKV1-27A0A075B6S5 117 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 TRAV1-1A0A0B4J248 108 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 HBBP68871 147 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 GGNQ86UU5 652 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 REG1AP05451 166 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 MEF2CQ06413 473 aaPredicted RBP16.22■□□□□ 0.19
TSR1-201ENST00000301364 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 TMEM170AQ8WVE7 144 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 SIAH2O43255 324 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 TMEM144Q7Z5S9 345 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 FNDC1Q4ZHG4 1894 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms