RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 VASH2Q86V25 355 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 MUC15Q8N387 334 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 BORCS7Q96B45 105 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 CLEC7AQ9BXN2 247 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 MS4A5Q9H3V2 200 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 WDR54Q9H977 334 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 PSG1P11464 419 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 IGFBP7Q16270 282 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 FAM53AQ6NSI3 398 aaPredicted RBP11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 TMEM108Q6UXF1 575 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 MRPL27Q9P0M9 148 aaKnown RBP11.22□□□□□ -0.61
RPUSD4-201ENST00000298317 LOC102724200A0A096LPH7 203 aaPredicted RBP11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 SPINK4O60575 86 aa11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 MRPL33O75394 65 aaKnown RBP11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 CENPWQ5EE01 88 aa11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 RPS19BP1Q86WX3 136 aaKnown RBP11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 Q8IYB0 196 aa11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 GALMQ96C23 342 aa11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 OSTCQ9NRP0 149 aa11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 SDK2Q58EX2 2172 aa11.21□□□□□ -0.61
RPUSD4-201ENST00000298317 TRAV9-2A0A087WT02 112 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 C12orf77C9JDV5 145 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 RFPL3SP0C7P2 107 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 GNG4P50150 75 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 ZXDAP98168 799 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 ZNF146Q15072 292 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 LCN12Q6JVE5 192 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 WDR86Q86TI4 376 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 ZNF439Q8NDP4 499 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 OR52L2PQ8NGH6 319 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 C1orf159Q96HA4 380 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 MEGF9Q9H1U4 602 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 LSM4Q9Y4Z0 139 aaKnown RBP11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 ESPL1Q14674 2120 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 USF3Q68DE3 2245 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 IGKV3D-15A0A087WSY6 115 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 IGHV5-10-1A0A0J9YXX1 117 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 LINC00473A8K010 186 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 MT-CO2P00403 227 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 OR9G9P0C7N8 305 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 FOXG1P55316 489 aaPredicted RBP11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 SELENOVP59797 346 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 EFNB3Q15768 340 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 WIPI1Q5MNZ9 446 aaPredicted RBP11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 RNASE7Q9H1E1 156 aaKnown RBP11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 ARL2-SNX15V9GYD0 113 aa11.2□□□□□ -0.62
RPUSD4-201ENST00000298317 A0A1W2PQM1 296 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 H0YJW9 148 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 ARG2P78540 354 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 SMIM27A0A1W2PRY6 76 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 NTF3P20783 257 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 SLC35B1P78383 322 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 TBR1Q16650 682 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 DOLPP1Q86YN1 238 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 KMT2EQ8IZD2 1858 aa11.19□□□□□ -0.62
RPUSD4-201ENST00000298317 TMEM30CPA0ZSE6 113 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 ISLRO14498 428 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 FOXH1O75593 365 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 IGLL1P15814 213 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 PQLC2Q6ZP29 291 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 SCCPDHQ8NBX0 429 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 SSMEM1Q8WWF3 244 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 POLDIP2Q9Y2S7 368 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 HELTA6NFD8 242 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 HBZP02008 142 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 APCSP02743 223 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 TCL1AP56279 114 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 LINC00205P59089 165 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 FXYD3Q14802 87 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 LRRC10Q5BKY1 277 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 MRPL54Q6P161 138 aaKnown RBP11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 WFDC8Q8IUA0 241 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 OR8B3Q8NGG8 313 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 OR8B2Q96RD0 313 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 RTL8AQ9BWD3 113 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 PHF7Q9BWX1 381 aaPredicted RBP11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 MYO9BQ13459 2157 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 MED12LQ86YW9 2145 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 CFAP54Q96N23 3096 aa11.18□□□□□ -0.62
RPUSD4-201ENST00000298317 FAM181BA6NEQ2 426 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 FAM90A9PA6NNJ1 464 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 CORTO00230 105 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 PSPNO60542 156 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 P04436 131 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 GUSBP11Q6P575 273 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 STPG3Q8N7X2 389 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 ZNF596Q8TC21 504 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 HSD17B10Q99714 261 aaKnown RBP11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 OOEPA6NGQ2 149 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 GFRA3O60609 400 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 CGAP01215 116 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 COL8A2P25067 703 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 SLAQ13239 276 aa11.17□□□□□ -0.62
RPUSD4-201ENST00000298317 EBLN2Q6P2I7 272 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms