RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 KCNS1Q96KK3 526 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 PPP1R17O96001 155 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 FGF11Q92914 225 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
FNDC1-201ENST00000297267 TYMSP04818 313 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 PDLIM4P50479 330 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 LINC00205P59089 165 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 TCF19Q9Y242 345 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 CHCHD2Q9Y6H1 151 aaPredicted RBP13.07□□□□□ -0.32
FNDC1-201ENST00000297267 VSIRQ9H7M9 311 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 C1QTNF9BB2RNN3 333 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 RNF144BQ7Z419 303 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 OR13C6PQ8NH95 151 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 MRPL13Q9BYD1 178 aaKnown RBP13.06□□□□□ -0.32
FNDC1-201ENST00000297267 CA1P00915 261 aaPredicted RBP13.06□□□□□ -0.32
FNDC1-201ENST00000297267 GCHFRP30047 84 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 ITLN2Q8WWU7 325 aaPredicted RBP13.06□□□□□ -0.32
FNDC1-201ENST00000297267 TMEM56-RWDD3S4R434 201 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 DANCRP0C864 163 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 CTSSP25774 331 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 FAM71F2Q6NXP2 309 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 DOCK4Q8N1I0 1966 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 IGHV1-2P23083 117 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 WDR82Q6UXN9 313 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 C1QL4Q86Z23 238 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 MIEN1Q9BRT3 115 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 TET1Q8NFU7 2136 aa13.06□□□□□ -0.32
FNDC1-201ENST00000297267 A6NNC1 897 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 SRSF6Q13247 344 aaKnown RBP13.05□□□□□ -0.32
FNDC1-201ENST00000297267 TNS1Q9HBL0 1735 aaKnown RBP13.05□□□□□ -0.32
FNDC1-201ENST00000297267 ZNF581Q9P0T4 197 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 TRBV20OR9-2A0A075B6H5 130 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 MRPL20Q9BYC9 149 aaKnown RBP13.05□□□□□ -0.32
FNDC1-201ENST00000297267 A0A0A6YYD4 124 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 FGF5P12034 268 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 LGALS3P17931 250 aaKnown RBP13.05□□□□□ -0.32
FNDC1-201ENST00000297267 DDTP30046 118 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 GPR183P32249 361 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 COL5A1-AS1Q5SY13 56 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 FAM131CQ96AQ9 280 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 AQP10Q96PS8 301 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 GZMBP10144 247 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 MMD2Q8IY49 270 aa13.05□□□□□ -0.32
FNDC1-201ENST00000297267 LAMTOR1Q6IAA8 161 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 MEIG1Q5JSS6 88 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 UNQ9370/PRO34162Q6UXP9 181 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 ACP7Q6ZNF0 438 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 MAP1LC3AQ9H492 121 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 MPDZO75970 2070 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 IGKV1D-13A0A0B4J2D9 117 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 SYNGR3O43761 229 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 IGKV1-13P0DP09 117 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 ZNF256Q9Y2P7 627 aaPredicted RBP13.04□□□□□ -0.32
FNDC1-201ENST00000297267 A8MWL6 223 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 CECR9P0C854 216 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 ZBTB34Q8NCN2 500 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 PLPPR1Q8TBJ4 325 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 TRAV12-3A0A0B4J271 114 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 PPP1R32Q7Z5V6 425 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 MFAP4P55083 255 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 CD69Q07108 199 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 SCNM1Q9BWG6 230 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 RPRMQ9NS64 109 aa13.04□□□□□ -0.32
FNDC1-201ENST00000297267 ZNF107Q9UII5 783 aaPredicted RBP13.04□□□□□ -0.32
FNDC1-201ENST00000297267 ADMP35318 185 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 LINC00518Q8N0U6 118 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 CTHRC1Q96CG8 243 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 A0A0G2JK05 382 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 FOXH1O75593 365 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 EFNB1P98172 346 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 CYP2G1PQ6ZSU1 146 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 TCF24Q7RTU0 167 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 F5P12259 2224 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 FER1L5A0AVI2 2057 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 TRGV3P03979 118 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 Q5PR19 223 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 TMEM170BQ5T4T1 132 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 C5orf63A6NC05 138 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 C12orf77C9JDV5 145 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 LY6DQ14210 128 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 LINC00470Q9BZP3 86 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 IGHV3-73A0A0B4J1V6 119 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 SAA1P0DJI8 122 aaPredicted RBP13.03□□□□□ -0.32
FNDC1-201ENST00000297267 MYOD1P15172 320 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 JKAMPQ9P055 326 aa13.03□□□□□ -0.32
FNDC1-201ENST00000297267 TMEM14DPA8MWL7 114 aa13.02□□□□□ -0.32
FNDC1-201ENST00000297267 C8orf88P0DMB2 117 aa13.02□□□□□ -0.32
FNDC1-201ENST00000297267 SERF2P84101 59 aa13.02□□□□□ -0.32
FNDC1-201ENST00000297267 CD200R1LQ6Q8B3 271 aa13.02□□□□□ -0.32
FNDC1-201ENST00000297267 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.32
FNDC1-201ENST00000297267 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.32
FNDC1-201ENST00000297267 LRRC37A2A6NM11 1700 aa13.02□□□□□ -0.32
FNDC1-201ENST00000297267 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.32
FNDC1-201ENST00000297267 WFDC1Q9HC57 220 aa13.02□□□□□ -0.32
FNDC1-201ENST00000297267 TRAV24A0A0B4J272 114 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 LOC105371267A0A1B0GV96 52 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 NPIPB8E9PQR5 432 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms