RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 HAX1O00165 279 aa14.5□□□□□ -0.09
CDCP1-201ENST00000296129 BTF3P20290 206 aaKnown RBP14.5□□□□□ -0.09
CDCP1-201ENST00000296129 CX3CL1P78423 397 aa14.5□□□□□ -0.09
CDCP1-201ENST00000296129 RELQ04864 619 aaPredicted RBP14.5□□□□□ -0.09
CDCP1-201ENST00000296129 IFI27L2Q9H2X8 130 aa14.5□□□□□ -0.09
CDCP1-201ENST00000296129 RELBQ01201 579 aa14.5□□□□□ -0.09
CDCP1-201ENST00000296129 ZIC4Q8N9L1 334 aa14.5□□□□□ -0.09
CDCP1-201ENST00000296129 SYT8Q8NBV8 401 aa14.5□□□□□ -0.09
CDCP1-201ENST00000296129 OR4B1Q8NGF8 309 aa14.5□□□□□ -0.09
CDCP1-201ENST00000296129 SRSF12Q8WXF0 261 aaKnown RBP14.5□□□□□ -0.09
CDCP1-201ENST00000296129 VWA8A3KMH1 1905 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 IGHV3OR16-12A0A075B7B8 117 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 A1L4Q6 167 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 IFITM10A6NMD0 228 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 EGR1P18146 543 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 PSMB2P49721 201 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 GAS1P54826 345 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 PKIAP61925 76 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 DPM3Q9P2X0 92 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 ANOS1P23352 680 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 CACNA1IQ9P0X4 2223 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 IGFBP2P18065 325 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 GOLT1AQ6ZVE7 132 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 GGNQ86UU5 652 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 RPRMQ9NS64 109 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 LINC00312Q9Y6C7 94 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 TRIOBPQ9H2D6 2365 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 PLXNA3P51805 1871 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 TRAV14DV4A0A0A6YYC5 116 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 IGHV1-18A0A0C4DH31 117 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 HLA-DQA1P01909 254 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 EFNB1P98172 346 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 MEF2CQ06413 473 aaPredicted RBP14.49□□□□□ -0.09
CDCP1-201ENST00000296129 RCC1LQ96I51 464 aaKnown RBP14.49□□□□□ -0.09
CDCP1-201ENST00000296129 IGKV3D-15A0A087WSY6 115 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 A0A0A6YYD4 124 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 SMAD7O15105 426 aaKnown RBP14.49□□□□□ -0.09
CDCP1-201ENST00000296129 IGKV3-15P01624 115 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 NPPCP23582 126 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 ATP5IP56385 69 aaPredicted RBP14.49□□□□□ -0.09
CDCP1-201ENST00000296129 WDR82Q6UXN9 313 aa14.49□□□□□ -0.09
CDCP1-201ENST00000296129 TRBV6-7A0A0A0MS04 114 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 CD99P14209 185 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 OR1P1Q8NH06 330 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 IGKV1D-13A0A0B4J2D9 117 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 IGKV1-13P0DP09 117 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 SFRP2Q96HF1 295 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 C18orf12Q96KH6 178 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 RTN4RL2Q86UN3 420 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 CDC42EP3Q9UKI2 254 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 ZFP30Q9Y2G7 519 aa14.48□□□□□ -0.09
CDCP1-201ENST00000296129 ZNF506Q5JVG8 444 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 SEMA5BQ9P283 1151 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 PRB3Q04118 309 aaPredicted RBP14.47□□□□□ -0.09
CDCP1-201ENST00000296129 SRSF9Q13242 221 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDCP1-201ENST00000296129 PAQR4Q8N4S7 273 aaPredicted RBP14.47□□□□□ -0.09
CDCP1-201ENST00000296129 GATAD1Q8WUU5 269 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 KLHDC3Q9BQ90 382 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 CCL3L1P16619 93 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 CDKN1AP38936 164 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 Q0VFX4 171 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 LAMTOR1Q6IAA8 161 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 ZNF497Q6ZNH5 498 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 NEU1Q99519 415 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 IGHV3OR16-13A0A075B7E8 117 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 IGHV3-74A0A0B4J1X5 117 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 CENPWQ5EE01 88 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 SAA2-SAA4A0A096LPE2 208 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 RNF222A6NCQ9 220 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 SAA2P0DJI9 122 aaPredicted RBP14.47□□□□□ -0.09
CDCP1-201ENST00000296129 NMUP48645 174 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 LYRM7Q5U5X0 104 aa14.47□□□□□ -0.09
CDCP1-201ENST00000296129 CENPVQ7Z7K6 275 aaPredicted RBP14.47□□□□□ -0.09
CDCP1-201ENST00000296129 TRAV24A0A0B4J272 114 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 TRGV3P03979 118 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 CRYGSP22914 178 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 DLX1P56177 255 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 RNASE6Q93091 150 aaKnown RBP14.46□□□□□ -0.09
CDCP1-201ENST00000296129 FBLN5Q9UBX5 448 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 GCGP01275 180 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 FOXF2Q12947 444 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 FOXG1P55316 489 aaPredicted RBP14.46□□□□□ -0.09
CDCP1-201ENST00000296129 RPS20P60866 119 aaKnown RBP14.46□□□□□ -0.09
CDCP1-201ENST00000296129 SPACA3Q8IXA5 215 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 DUX5Q96PT3 197 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 PHLDA3Q9Y5J5 127 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 IGHV3-66A0A0C4DH42 116 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 CXorf65A6NEN9 183 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 C5orf52A6NGY3 159 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 GGACTQ9BVM4 153 aa14.46□□□□□ -0.09
CDCP1-201ENST00000296129 FOXA2Q9Y261 457 aaPredicted RBP14.46□□□□□ -0.09
CDCP1-201ENST00000296129 CRXO43186 299 aaPredicted RBP14.45□□□□□ -0.1
CDCP1-201ENST00000296129 GPX1P07203 203 aa14.45□□□□□ -0.1
CDCP1-201ENST00000296129 ZCCHC24Q8N2G6 241 aaKnown RBP14.45□□□□□ -0.1
CDCP1-201ENST00000296129 NABP1Q96AH0 204 aa14.45□□□□□ -0.1
CDCP1-201ENST00000296129 FAM168AQ92567 244 aa14.45□□□□□ -0.1
CDCP1-201ENST00000296129 CGAP01215 116 aa14.45□□□□□ -0.1
CDCP1-201ENST00000296129 FNDC1Q4ZHG4 1894 aaPredicted RBP14.45□□□□□ -0.1
CDCP1-201ENST00000296129 FAM53AQ6NSI3 398 aaPredicted RBP14.45□□□□□ -0.1
CDCP1-201ENST00000296129 AREGP15514 252 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms