RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 KRTAP27-1Q3LI81 207 aa5.86□□□□□ -1.47
VPS8-201ENST00000287546 TTC32Q5I0X7 151 aa5.86□□□□□ -1.47
VPS8-201ENST00000287546 FAM53AQ6NSI3 398 aaPredicted RBP5.86□□□□□ -1.47
VPS8-201ENST00000287546 OR1B1Q8NGR6 318 aa5.86□□□□□ -1.47
VPS8-201ENST00000287546 FAM216AQ8WUB2 273 aa5.86□□□□□ -1.47
VPS8-201ENST00000287546 TUBD1Q9UJT1 453 aa5.86□□□□□ -1.47
VPS8-201ENST00000287546 TRAV14DV4A0A0A6YYC5 116 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 TRBV6-6A0A0A6YYG2 114 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 IGHV1-69-2A0A0G2JMI3 117 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 C5orf63A6NC05 138 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 SOX15O60248 233 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 CFDP00746 253 aaPredicted RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 PGA5P0DJD9 388 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 GATA4P43694 442 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 ZNF154Q13106 437 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 HERPUD1Q15011 391 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 ATP6V1FQ16864 119 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 IGFL3Q6UXB1 125 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 OR10C1Q96KK4 312 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 LINC01587Q99440 93 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 OR2D2Q9H210 308 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 SIRT7Q9NRC8 400 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 SLC45A2Q9UMX9 530 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 TIMP3P35625 211 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 LPAR6P43657 344 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 LCN2P80188 198 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 TAGLNQ01995 201 aaKnown RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 HGFACQ04756 655 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 MIDNQ504T8 468 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 ZNF66Q6ZN08 573 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 BIVMQ86UB2 503 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 TMEM252Q8N6L7 170 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 LHX4Q969G2 390 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 RMI2Q96E14 147 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 NOL4LQ96MY1 436 aaPredicted RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 PRR13Q9NZ81 148 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 CACNG5Q9UF02 275 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 TRBV6-7A0A0A0MS04 114 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 NKX2-6A6NCS4 301 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 MBD3L4A6NDZ8 208 aaPredicted RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 MBD3L3A6NE82 208 aaPredicted RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 MBD3L5A6NJ08 208 aaPredicted RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 FAM90A26D6RGX4 464 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 OR2C1O95371 312 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 SLC25A16P16260 332 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 PRDX2P32119 198 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 PSG7Q13046 419 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 ADIRFQ15847 76 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 IGFL2Q6UWQ7 119 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 MBD3L2Q8NHZ7 208 aaPredicted RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 MRAPQ8TCY5 172 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 MRGPRDQ8TDS7 321 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 MARS2Q96GW9 593 aaKnown RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 NKX6-2Q9C056 277 aaPredicted RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 SAV1Q9H4B6 383 aaPredicted RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 MSL2Q9HCI7 577 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 RCC2Q9P258 522 aaKnown RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 SPENQ96T58 3664 aaKnown RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.85□□□□□ -1.474e-13■■■■□ 24.8
VPS8-201ENST00000287546 CLEC18AA5D8T8 446 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 E9PLN8 166 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 F8WEM9 126 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 UCP1P25874 307 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 SUMO2P61956 95 aaKnown RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 Q6ZS92 163 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 CLEC18CQ8NCF0 446 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 LSM10Q969L4 123 aaKnown RBP5.85□□□□□ -1.47
VPS8-201ENST00000287546 NEU1Q99519 415 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 OR5AC2Q9NZP5 309 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 DOCK10Q96BY6 2186 aa5.85□□□□□ -1.47
VPS8-201ENST00000287546 IGHV2OR16-5A0A0B4J2B6 119 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 MEX3AA1L020 520 aaKnown RBP5.84□□□□□ -1.47
VPS8-201ENST00000287546 NPFFO15130 113 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 SLC25A20O43772 301 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 FOXG1P55316 489 aaPredicted RBP5.84□□□□□ -1.47
VPS8-201ENST00000287546 SPCS3P61009 180 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 GCSAMQ8N6F7 178 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 OR4P4Q8NGL7 312 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 DUX3Q96PT4 197 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 TRGV4A0A0C4DH28 118 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 B4DSR2 109 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 PGLYRP1O75594 196 aaPredicted RBP5.84□□□□□ -1.47
VPS8-201ENST00000287546 NAPSAO96009 420 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 DAOP14920 347 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 NPPCP23582 126 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 POLR2GP62487 172 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS8-201ENST00000287546 EWSR1Q01844 656 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS8-201ENST00000287546 SNRNP40Q96DI7 357 aaKnown RBP5.84□□□□□ -1.47
VPS8-201ENST00000287546 LURAP1Q96LR2 239 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 NRIP2Q9BQI9 281 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 IFT22Q9H7X7 185 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 PGPEP1Q9NXJ5 209 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 H7C1H1 209 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 GPX1P07203 203 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 HKR1P10072 659 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 HIST1H1BP16401 226 aaKnown RBP5.84□□□□□ -1.47
VPS8-201ENST00000287546 PAPPA-AS1Q5QFB9 102 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 ZNF600Q6ZNG1 722 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 PDPNQ86YL7 162 aa5.84□□□□□ -1.47
VPS8-201ENST00000287546 H1FOOQ8IZA3 346 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms