RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 J3QT63 122 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 RPS11P62280 158 aaKnown RBP eCLIP4.92□□□□□ -1.62
VCAN-201ENST00000265077 EIF4EBP2Q13542 120 aaPredicted RBP4.92□□□□□ -1.62
VCAN-201ENST00000265077 C1QL3Q5VWW1 255 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 GRAMD2BQ96HH9 432 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 LINC00470Q9BZP3 86 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 TRAV8-2A0A0B4J237 113 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 MSGN1A6NI15 193 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 MS4A5Q9H3V2 200 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 MUC21A0A0G2JKD1 596 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 MUC21A0A140T8X8 626 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 LYZP61626 148 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 MUC21Q5SSG8 566 aa4.92□□□□□ -1.62
VCAN-201ENST00000265077 AREGP15514 252 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 STPG4Q8N801 248 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 SERGEFQ9UGK8 458 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 IGHV5-51A0A0C4DH38 117 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 IGHV3-64DA0A0J9YX35 117 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 K7EP34 96 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 SPRY3O43610 288 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 KLF7O75840 302 aaPredicted RBP4.91□□□□□ -1.62
VCAN-201ENST00000265077 ASAH2BP0C7U1 165 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 SNRNP40Q96DI7 357 aaKnown RBP4.91□□□□□ -1.62
VCAN-201ENST00000265077 TM4SF19Q96DZ7 209 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 SDF2L1Q9HCN8 221 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 GNB2P62879 340 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 PSG9Q00887 426 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 ZP4Q12836 540 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 MMD2Q8IY49 270 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 NUP210Q8TEM1 1887 aaPredicted RBP4.91□□□□□ -1.62
VCAN-201ENST00000265077 BGLAPP02818 100 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 NANOS3P60323 173 aaKnown RBP4.91□□□□□ -1.62
VCAN-201ENST00000265077 PDCD1Q15116 288 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 C1orf100Q5SVJ3 147 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 OR2M3Q8NG83 312 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 TMEM8BA6NDV4 472 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 J3QR06 171 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 LRRC29Q8WV35 223 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 C5orf66Q9H5L9 145 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 C1RLQ9NZP8 487 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 B5MCH6 92 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 MPV17L2Q567V2 206 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 TRBV5-7A0A0A0MS05 114 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A10PA6NDY2 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A18PA6NE21 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A16PA6NEW6 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A20PA6NIJ5 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A8PA6NJQ4 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A7PA6NKC0 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A22PA8MWA6 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A12PA8MX19 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A5PA8MXJ8 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A23PA8MXZ1 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A15PP0C7V4 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A13PP0C7W8 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A14PP0C7W9 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM90A24PP0C7X0 464 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 DRD3P35462 400 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 ALKBH6Q3KRA9 238 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 UBALD1Q8TB05 177 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 MRPS18BQ9Y676 258 aaKnown RBP4.91□□□□□ -1.62
VCAN-201ENST00000265077 LTBP4Q8N2S1 1624 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 KIAA1644Q3SXP7 199 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 NR2C2APQ86WQ0 139 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 RFESDQ8TAC1 157 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 IZUMO4Q1ZYL8 232 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 TMEM222Q9H0R3 208 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 TRAV5A0A0B4J249 113 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 SYNGR1O43759 233 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 FAM157CP0CG43 387 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 TNFAIP6P98066 277 aaPredicted RBP4.91□□□□□ -1.62
VCAN-201ENST00000265077 WIPI1Q5MNZ9 446 aaPredicted RBP4.91□□□□□ -1.62
VCAN-201ENST00000265077 ZNF414Q96IQ9 312 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 RASL10BQ96S79 203 aa4.91□□□□□ -1.62
VCAN-201ENST00000265077 SHISA3A0PJX4 238 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 CEACAM3P40198 252 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 UNQ9370/PRO34162Q6UXP9 181 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 PLPPR1Q8TBJ4 325 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 TMEM45BQ96B21 275 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 A0A0G2JK05 382 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 HYPMO75409 117 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 UCP2P55851 309 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 PLAURQ03405 335 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 CXorf67Q86X51 503 aaPredicted RBP4.9□□□□□ -1.62
VCAN-201ENST00000265077 NPIPB13A6NJU9 1138 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 DEFB108AA8MXU0 73 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 NPIPB4C9JG80 1138 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 ZXDAP98168 799 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 NEUROG1Q92886 237 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 MS4A6AQ9H2W1 248 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 ZNF462Q96JM2 2506 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 ACANP16112 2415 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 ATXN7O15265 892 aaPredicted RBP4.9□□□□□ -1.62
VCAN-201ENST00000265077 MEOX1P50221 254 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 RTP5Q14D33 572 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 ASCL5Q7RTU5 278 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.9□□□□□ -1.62
VCAN-201ENST00000265077 LRRC75AQ8NAA5 344 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 OR10AC1Q8NH08 325 aa4.9□□□□□ -1.62
VCAN-201ENST00000265077 PSMB11A5LHX3 300 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms