RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CRYBB3P26998 211 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 TFF3Q07654 80 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 MORN2Q502X0 79 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 PAFAH1B2P68402 229 aa14.02□□□□□ -0.16
PHRF1-201ENST00000264555 APC2O95996 2303 aa14.02□□□□□ -0.16
PHRF1-201ENST00000264555 NAPSAO96009 420 aa14.02□□□□□ -0.16
PHRF1-201ENST00000264555 WDR25Q64LD2 544 aaPredicted RBP14.02□□□□□ -0.16
PHRF1-201ENST00000264555 IFI27L2Q9H2X8 130 aa14.02□□□□□ -0.16
PHRF1-201ENST00000264555 CEP250Q9BV73 2442 aa14.02□□□□□ -0.17
PHRF1-201ENST00000264555 ZNF343Q6P1L6 599 aa14.02□□□□□ -0.17
PHRF1-201ENST00000264555 CLDND2Q8NHS1 167 aa14.02□□□□□ -0.17
PHRF1-201ENST00000264555 KIR2DL2P43627 348 aaPredicted RBP14.02□□□□□ -0.17
PHRF1-201ENST00000264555 VPS25Q9BRG1 176 aa14.02□□□□□ -0.17
PHRF1-201ENST00000264555 TMEM191AQ9H0A3 160 aa14.02□□□□□ -0.17
PHRF1-201ENST00000264555 MBNL2Q5VZF2 373 aaKnown RBP14.01□□□□□ -0.17
PHRF1-201ENST00000264555 RPL30P62888 115 aaKnown RBP14.01□□□□□ -0.17
PHRF1-201ENST00000264555 ATRAIDQ6UW56 229 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 GOLT1BQ9Y3E0 138 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 OR2T8A6NH00 312 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 TIMP3P35625 211 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 PKIAP61925 76 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 SLC35B1P78383 322 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 ZNF524Q96C55 264 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 J3QR89 54 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 RBFOX2O43251 390 aaKnown RBP eCLIP14.01□□□□□ -0.172e-6■■■□□ 16.2
PHRF1-201ENST00000264555 PPOXP50336 477 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 CYP2G1PQ6ZSU1 146 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 UFC1Q9Y3C8 167 aa14.01□□□□□ -0.17
PHRF1-201ENST00000264555 OR1P1Q8NH06 330 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 SCN8AQ9UQD0 1980 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 F5H697 171 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 RAMP3O60896 148 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 VAMP3Q15836 100 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 UNQ5815/PRO19632Q6UWF5 114 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 DPF1Q92782 380 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 SFRP2Q96HF1 295 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 WISP1O95388 367 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 HLA-DQA1P01909 254 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 MAP1LC3CQ9BXW4 147 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 SAA2-SAA4A0A096LPE2 208 aa14□□□□□ -0.17
PHRF1-201ENST00000264555 SAA2P0DJI9 122 aaPredicted RBP14□□□□□ -0.17
PHRF1-201ENST00000264555 SRSF4Q08170 494 aaKnown RBP14□□□□□ -0.17
PHRF1-201ENST00000264555 BMPR1BO00238 502 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 ZNF137PP52743 207 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 PTTG1IPP53801 180 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 MRPL20Q9BYC9 149 aaKnown RBP13.99□□□□□ -0.17
PHRF1-201ENST00000264555 NUP210Q8TEM1 1887 aaPredicted RBP13.99□□□□□ -0.17
PHRF1-201ENST00000264555 FXYD3Q14802 87 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 ASCL4Q6XD76 172 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 RTN4RL2Q86UN3 420 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 C11orf42Q8N5U0 333 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 GSX1Q9H4S2 264 aaPredicted RBP13.99□□□□□ -0.17
PHRF1-201ENST00000264555 WFDC1Q9HC57 220 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 FCGR2BP31994 310 aaPredicted RBP13.99□□□□□ -0.17
PHRF1-201ENST00000264555 NPIPB11E5RHQ5 1161 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 RRHO14718 337 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 CYTL1Q9NRR1 136 aa13.99□□□□□ -0.17
PHRF1-201ENST00000264555 TMSB15BA0A087X1C1 80 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 TFF1P04155 84 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 IGFBP2P18065 325 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 CDX1P47902 265 aaPredicted RBP13.98□□□□□ -0.17
PHRF1-201ENST00000264555 HOXA4Q00056 320 aaPredicted RBP13.98□□□□□ -0.17
PHRF1-201ENST00000264555 NEU4Q8WWR8 484 aaPredicted RBP13.98□□□□□ -0.17
PHRF1-201ENST00000264555 CACNG8Q8WXS5 425 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 SRRM5B3KS81 715 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 DPM3Q9P2X0 92 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 A0A087WWC5 75 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 TRBV6-6A0A0A6YYG2 114 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 M0R143 59 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 IGHV3-48P01763 117 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 SRSF3P84103 164 aaKnown RBP13.98□□□□□ -0.17
PHRF1-201ENST00000264555 PEAR1Q5VY43 1037 aaPredicted RBP13.98□□□□□ -0.17
PHRF1-201ENST00000264555 DUTP33316 252 aaKnown RBP13.98□□□□□ -0.17
PHRF1-201ENST00000264555 PIMREGQ9BSJ6 248 aa13.98□□□□□ -0.17
PHRF1-201ENST00000264555 MRPL18Q9H0U6 180 aaKnown RBP13.98□□□□□ -0.17
PHRF1-201ENST00000264555 PI4KAP42356 2102 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 HGFACQ04756 655 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 HSPB8Q9UJY1 196 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 TP53BP1Q12888 1972 aaPredicted RBP13.97□□□□□ -0.17
PHRF1-201ENST00000264555 FANCMQ8IYD8 2048 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 FAM90A9PA6NNJ1 464 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 IGHG3P01860 377 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 EGR1P18146 543 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 ZCCHC14Q8WYQ9 949 aaKnown RBP13.97□□□□□ -0.17
PHRF1-201ENST00000264555 TRAV34A0A0B4J273 112 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 TMEM189A5PLL7 270 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 TRGC1P0CF51 173 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 LOXL3P58215 753 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 Q6ZS49 121 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 METTL26Q96S19 204 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 HSPB7Q9UBY9 170 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 E9PLN8 166 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 Q6ZN92 141 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 LINC00305Q7Z4B0 112 aa13.97□□□□□ -0.17
PHRF1-201ENST00000264555 HELZP42694 1942 aaKnown RBP13.97□□□□□ -0.17
PHRF1-201ENST00000264555 C15orf61A6NNL5 157 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 UPK2O00526 184 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 ACAA1P09110 424 aaPredicted RBP13.96□□□□□ -0.17
PHRF1-201ENST00000264555 PROK2Q9HC23 129 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 RNASEH2CQ8TDP1 164 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms