RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 DNASE2BQ8WZ79 361 aa11.5□□□□□ -0.57
TCF3-201ENST00000262965 PARD6GQ9BYG4 376 aaPredicted RBP11.5□□□□□ -0.57
TCF3-201ENST00000262965 ZNF430Q9H8G1 570 aaPredicted RBP11.5□□□□□ -0.57
TCF3-201ENST00000262965 SDF2L1Q9HCN8 221 aa11.5□□□□□ -0.57
TCF3-201ENST00000262965 FOXJ2Q9P0K8 574 aa11.5□□□□□ -0.57
TCF3-201ENST00000262965 SNAI2O43623 268 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
TCF3-201ENST00000262965 ERASQ7Z444 233 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 ZNF502Q8TBZ5 544 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 TMEM208Q9BTX3 173 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 WFDC1Q9HC57 220 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 ICAM4Q14773 271 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 TWIST1Q15672 202 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 LYZL4Q96KX0 146 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 REG4Q9BYZ8 158 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 TFF1P04155 84 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 CKS2P33552 79 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 LTBRP36941 435 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 PMCHL1Q16048 86 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 DGAT2L7PQ6IED9 249 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 C5orf24Q7Z6I8 188 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 ARL6IP6Q8N6S5 226 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 ZNF525Q8N782 197 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 LINC00469Q8N7U9 141 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 GCSHP23434 173 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 SUPT4H1P63272 117 aaKnown RBP11.49□□□□□ -0.57
TCF3-201ENST00000262965 DMRTA1Q5VZB9 504 aa11.49□□□□□ -0.57
TCF3-201ENST00000262965 F11RQ9Y624 299 aaKnown RBP11.49□□□□□ -0.57
TCF3-201ENST00000262965 HEATR5AQ86XA9 2040 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 H3BVH4 76 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 F2RL2O00254 374 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
TCF3-201ENST00000262965 SCNM1Q9BWG6 230 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 RABAC1Q9UI14 185 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 PTGDSP41222 190 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 RPL23P62829 140 aaKnown RBP11.48□□□□□ -0.57
TCF3-201ENST00000262965 P2RY6Q15077 328 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 SLC25A34Q6PIV7 304 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 DPRXA6NFQ7 191 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 DLL1O00548 723 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 IL6RP08887 468 aaPredicted RBP11.48□□□□□ -0.57
TCF3-201ENST00000262965 C1QTNF9P0C862 333 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 STPG1Q5TH74 334 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 MYOZ3Q8TDC0 251 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 TIMP4Q99727 224 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 AP5S1Q9NUS5 200 aa11.48□□□□□ -0.57
TCF3-201ENST00000262965 MUC21A0A0G2JKD1 596 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 MUC21A0A140T8X8 626 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 TMEM189A5PLL7 270 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 COLCA2A8K830 154 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 NAPSAO96009 420 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 IGFBP2P18065 325 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 KIR2DL2P43627 348 aaPredicted RBP11.47□□□□□ -0.57
TCF3-201ENST00000262965 MUC21Q5SSG8 566 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 OR13A1Q8NGR1 328 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 ZFP30Q9Y2G7 519 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 GFRA1P56159 465 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 GOLT1AQ6ZVE7 132 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 GCSAMQ8N6F7 178 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
TCF3-201ENST00000262965 C5orf63A6NC05 138 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 AMY1AP04745 511 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 GUCD1Q96NT3 240 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 REPIN1Q9BWE0 567 aaKnown RBP11.47□□□□□ -0.57
TCF3-201ENST00000262965 C1RLQ9NZP8 487 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 ARFGEF3Q5TH69 2177 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 COX5BP10606 129 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 FOLR2P14207 255 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 STARD6P59095 220 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
TCF3-201ENST00000262965 PRR33A8MZF0 331 aa11.46□□□□□ -0.57
TCF3-201ENST00000262965 S4R3C0 116 aa11.46□□□□□ -0.57
TCF3-201ENST00000262965 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.57
TCF3-201ENST00000262965 C2orf83Q53S99 150 aa11.46□□□□□ -0.57
TCF3-201ENST00000262965 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.57
TCF3-201ENST00000262965 FAM117AQ9C073 453 aa11.46□□□□□ -0.57
TCF3-201ENST00000262965 FOXD3Q9UJU5 478 aaPredicted RBP11.46□□□□□ -0.57
TCF3-201ENST00000262965 JPT1Q9UK76 154 aa11.46□□□□□ -0.57
TCF3-201ENST00000262965 PILRBQ9UKJ0 227 aa11.46□□□□□ -0.57
TCF3-201ENST00000262965 EFNA2O43921 213 aa11.46□□□□□ -0.58
TCF3-201ENST00000262965 VENTXO95231 258 aa11.46□□□□□ -0.58
TCF3-201ENST00000262965 CELA3BP08861 270 aa11.46□□□□□ -0.58
TCF3-201ENST00000262965 MBNL2Q5VZF2 373 aaKnown RBP11.46□□□□□ -0.58
TCF3-201ENST00000262965 PLPPR1Q8TBJ4 325 aa11.46□□□□□ -0.58
TCF3-201ENST00000262965 GATAD1Q8WUU5 269 aa11.46□□□□□ -0.58
TCF3-201ENST00000262965 VSIRQ9H7M9 311 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms