RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 ZFP92A6NM28 416 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 H0YJW9 148 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 M0R036 132 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 FFAR4Q5NUL3 377 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 CYB561D1Q8N8Q1 229 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 HINT2Q9BX68 163 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 RPS10P5Q9NQ39 176 aa11.74□□□□□ -0.53
PRKAB1-201ENST00000229328 C7orf77A4D0Y5 90 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 UPK2O00526 184 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 NDUFS6O75380 124 aaKnown RBP11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 ZNF841Q6ZN19 808 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 SLC25A22Q9H936 323 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 TNCP24821 2201 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 TACC2O95359 2948 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 SMCO3A2RU48 225 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 IGHV2-70P01814 119 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 HSPB1P04792 205 aaKnown RBP11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 SAA1P0DJI8 122 aaPredicted RBP11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 IGHV1-8P0DP01 117 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 RPP30P78346 268 aaKnown RBP11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 NANPQ8TBE9 248 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 SLC39A9Q9NUM3 307 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 WDR83OSQ9Y284 106 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 PUS1Q9Y606 427 aaKnown RBP eCLIP11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 LY86O95711 162 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 OR5AN1Q8NGI8 311 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 OR10G4Q8NGN3 311 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 OR10G9Q8NGN4 311 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 OR10G7Q8NGN6 311 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 ZNF596Q8TC21 504 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 ST6GALNAC6Q969X2 333 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 TMPRSS5Q9H3S3 457 aa11.73□□□□□ -0.53
PRKAB1-201ENST00000229328 HIVEP3Q5T1R4 2406 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 IFNA4P05014 189 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 PPOXP50336 477 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 KHDC3LQ587J8 217 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 TREML4Q6UXN2 200 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 LINC00311Q8N616 119 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 ZNF709Q8N972 641 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 NABP2Q9BQ15 211 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 RALYQ9UKM9 306 aaKnown RBP11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 CA2P00918 260 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 BCL2P10415 239 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 LHX4Q969G2 390 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 C1orf159Q96HA4 380 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 HARBI1Q96MB7 349 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 PRNDQ9UKY0 176 aa11.72□□□□□ -0.53
PRKAB1-201ENST00000229328 MALRD1Q5VYJ5 2156 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 PKD1L2Q7Z442 2459 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 CACNA1AO00555 2505 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 A0A087X0M5 115 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 TEX50A0A1B0GTY4 177 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 A0A1B0GX30 115 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 KBTBD11O94819 623 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 APOA2P02652 100 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 SOD3P08294 240 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 C8orf31Q8N9H6 132 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 SLC24A4Q8NFF2 622 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 RAB39BQ96DA2 213 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 GSN-AS1Q9NRJ2 163 aa11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 SPTBN1Q01082 2364 aaKnown RBP11.71□□□□□ -0.53
PRKAB1-201ENST00000229328 NPY1RP25929 384 aa11.71□□□□□ -0.54
PRKAB1-201ENST00000229328 RAB11AP62491 216 aa11.71□□□□□ -0.54
PRKAB1-201ENST00000229328 OR9G1Q8NH87 305 aa11.71□□□□□ -0.54
PRKAB1-201ENST00000229328 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.54
PRKAB1-201ENST00000229328 BET1LQ9NYM9 111 aa11.71□□□□□ -0.54
PRKAB1-201ENST00000229328 TRBV23-1A0A0A0MS06 115 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 H3BQ15 152 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 PRCDQ00LT1 54 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 TMEM177Q53S58 311 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 ARSJQ5FYB0 599 aaPredicted RBP11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 OSR1Q8TAX0 266 aaPredicted RBP11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 MGST2Q99735 147 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 ENY2Q9NPA8 101 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 SMCO4Q9NRQ5 59 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 COLCA2A8K830 154 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 C17orf112F2Z3M2 114 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 MBP02144 154 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 UQCRFS1P47985 274 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 C11orf71Q6IPW1 123 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 OR10W1Q8NGF6 305 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 ISOC2Q96AB3 205 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 FLYWCH2Q96CP2 140 aaKnown RBP11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 RITA1Q96K30 269 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 GGACTQ9BVM4 153 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 ZNF257Q9Y2Q1 563 aa11.7□□□□□ -0.54
PRKAB1-201ENST00000229328 A0A1W2PPR1 153 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 ZNF137PP52743 207 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 DLK1P80370 383 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 PLEKHA3Q9HB20 300 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 CBLN4Q9NTU7 201 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 E7EUB6 86 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 GATCO43716 136 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms