RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TPTE2P1Q5T6R2 138 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 HAPLN4Q86UW8 402 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 IGHV3-72A0A0B4J1Y9 119 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 RAB19A4D1S5 217 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 IFNA5P01569 189 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 FAM157CP0CG43 387 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 HOXB4P17483 251 aaPredicted RBP14.65□□□□□ -0.06
VIM-201ENST00000224237 VDAC2P45880 294 aaPredicted RBP14.65□□□□□ -0.06
VIM-201ENST00000224237 SULT1A2P50226 295 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 UQCC3Q6UW78 93 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 OR5B3Q8NH48 314 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 HEYLQ9NQ87 328 aaPredicted RBP14.65□□□□□ -0.06
VIM-201ENST00000224237 TET2Q6N021 2002 aaPredicted RBP14.65□□□□□ -0.06
VIM-201ENST00000224237 WNK2Q9Y3S1 2297 aa14.65□□□□□ -0.06
VIM-201ENST00000224237 ANKRD17O75179 2603 aaKnown RBP14.64□□□□□ -0.07
VIM-201ENST00000224237 ABCA2Q9BZC7 2435 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 IGHV4-61A0A0C4DH41 118 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 A0A1W2PPI3 338 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 TOX4O94842 621 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 IGLV2-23P01705 113 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 SLC38A11Q08AI6 406 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 VMA21Q3ZAQ7 101 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 HIST2H2BCQ6DN03 193 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 OR8G2PQ6IF36 304 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 TMEM167AQ8TBQ9 72 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 PINX1Q96BK5 328 aaKnown RBP14.64□□□□□ -0.07
VIM-201ENST00000224237 SAT2Q96F10 170 aaPredicted RBP14.64□□□□□ -0.07
VIM-201ENST00000224237 ENY2Q9NPA8 101 aa14.64□□□□□ -0.07
VIM-201ENST00000224237 IGHV4-30-2A0A087WSY4 118 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 PMS2P5A8MQ11 134 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 ATP6V0CP27449 155 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 DVL1P1P54792 670 aaPredicted RBP14.63□□□□□ -0.07
VIM-201ENST00000224237 RPL8P62917 257 aaKnown RBP14.63□□□□□ -0.07
VIM-201ENST00000224237 PRCDQ00LT1 54 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 LDLRAD2Q5SZI1 272 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 SLC25A24Q6NUK1 477 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 OR10P1Q8NGE3 313 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 GNPNAT1Q96EK6 184 aaPredicted RBP14.63□□□□□ -0.07
VIM-201ENST00000224237 C15orf62A8K5M9 175 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 ZNF705EA8MWA4 302 aaPredicted RBP14.63□□□□□ -0.07
VIM-201ENST00000224237 FAM157AC9JC47 383 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 RNASEK-C17orf49H0YIS7 233 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 IFNA10P01566 189 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 ATP6V1FQ16864 119 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 SH3BGRL3Q9H299 93 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 PLEKHA3Q9HB20 300 aa14.63□□□□□ -0.07
VIM-201ENST00000224237 TEX46H3BTG2 121 aa14.62□□□□□ -0.07
VIM-201ENST00000224237 MINOS1Q5TGZ0 78 aa14.62□□□□□ -0.07
VIM-201ENST00000224237 COMMD5Q9GZQ3 224 aa14.62□□□□□ -0.07
VIM-201ENST00000224237 LPAR2Q9HBW0 351 aa14.62□□□□□ -0.07
VIM-201ENST00000224237 MINOS1-NBL1R4GNA1 71 aa14.62□□□□□ -0.07
VIM-201ENST00000224237 TEX50A0A1B0GTY4 177 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 OR8U8P0C7N1 319 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 RAB5CP51148 216 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 SUN5Q8TC36 379 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 TBX15Q96SF7 602 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 RNF5Q99942 180 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 PARD6GQ9BYG4 376 aaPredicted RBP14.61□□□□□ -0.07
VIM-201ENST00000224237 OOSP1A8MZH6 123 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 TIMM23O14925 209 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 SLC25A17O43808 307 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 MYOD1P15172 320 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 LGALS4P56470 323 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 RAB11AP62491 216 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 CCDC144NLQ6NUI1 221 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 LHFPL4Q7Z7J7 247 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 TEX45Q8NA69 505 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 SCGB1C1Q8TD33 95 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 RITA1Q96K30 269 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 TMEM147Q9BVK8 224 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 HINT2Q9BX68 163 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 PLA2G2EQ9NZK7 142 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 HILPDAQ9Y5L2 63 aa14.61□□□□□ -0.07
VIM-201ENST00000224237 CD1BP29016 333 aa14.6□□□□□ -0.07
VIM-201ENST00000224237 UBE2E1P51965 193 aa14.6□□□□□ -0.07
VIM-201ENST00000224237 HABP2Q14520 560 aaPredicted RBP14.6□□□□□ -0.07
VIM-201ENST00000224237 SLC24A4Q8NFF2 622 aa14.6□□□□□ -0.07
VIM-201ENST00000224237 OR1L8Q8NGR8 309 aa14.6□□□□□ -0.07
VIM-201ENST00000224237 OR2G3Q8NGZ4 309 aa14.6□□□□□ -0.07
VIM-201ENST00000224237 TBL2Q9Y4P3 447 aaKnown RBP14.6□□□□□ -0.07
VIM-201ENST00000224237 NBPF19A0A087WUL8 3843 aa14.6□□□□□ -0.07
VIM-201ENST00000224237 A0A1W2PRD5 423 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 A0A1W2PRF3 423 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 A0A1W2PRM7 423 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 OPN1MWP04001 364 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 OPN1MW2P0DN77 364 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 OPN1MW3P0DN78 364 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 F2RL1P55085 397 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 BLOC1S1P78537 153 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 RUNX1Q01196 453 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 LRRC75BQ2VPJ9 315 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 THNSL2Q86YJ6 484 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 WDR61Q9GZS3 305 aaKnown RBP14.59□□□□□ -0.07
VIM-201ENST00000224237 ZNF430Q9H8G1 570 aaPredicted RBP14.59□□□□□ -0.07
VIM-201ENST00000224237 NDUFA4L2Q9NRX3 87 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 UQCC1Q9NVA1 299 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 SVEP1Q4LDE5 3571 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 UBE2L5PA0A1B0GUS4 154 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 UMAD1C9J7I0 102 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 SCO1O75880 301 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms