RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 RNF115Q9Y4L5 304 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 SPG11Q96JI7 2443 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 ZNF729A6NN14 1252 aaPredicted RBP10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 CXCL1P09341 107 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 AGAP20933 346 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 HEPN1Q6WQI6 88 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 CA5BP1Q8WTZ4 195 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 MBD3L1Q8WWY6 194 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 C1QTNF9BB2RNN3 333 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 RRHO14718 337 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 YPEL1O60688 119 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 CRISP2P16562 243 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 IER3P46695 156 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 PRRX1P54821 245 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 SPNS3Q6ZMD2 512 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 YPEL2Q96QA6 119 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 SAA2-SAA4A0A096LPE2 208 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 TRBV23-1A0A0A0MS06 115 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 FAM157AC9JC47 383 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 SAA2P0DJI9 122 aaPredicted RBP10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 CCL3L1P16619 93 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 PMCHP20382 165 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 ERVFRD-1P60508 538 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 MRPL54Q6P161 138 aaKnown RBP10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 TMEM14EPQ6UXP3 125 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 ZNF439Q8NDP4 499 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 LINC00869P0C866 280 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 RPEL1Q2QD12 228 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 TOMM20LQ6UXN7 152 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 WFIKKN1Q96NZ8 548 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 GGACTQ9BVM4 153 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 ZNF586Q9NXT0 402 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 SLC25A15Q9Y619 301 aa10.28□□□□□ -0.76
TM9SF4-201ENST00000217315 NPIPB11E5RHQ5 1161 aa10.27□□□□□ -0.76
TM9SF4-201ENST00000217315 GATA2P23769 480 aaPredicted RBP10.27□□□□□ -0.76
TM9SF4-201ENST00000217315 RPL23P62829 140 aaKnown RBP10.27□□□□□ -0.76
TM9SF4-201ENST00000217315 KRTAP27-1Q3LI81 207 aa10.27□□□□□ -0.76
TM9SF4-201ENST00000217315 SNURFLB1AK76 121 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 IL6RP08887 468 aaPredicted RBP10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 IGFBP2P18065 325 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 CAMPP49913 170 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 ERVK11-1P61568 191 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 IQCJQ1A5X6 159 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 C10orf91Q5T1B1 145 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 Q6ZR03 302 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 OR1L4Q8NGR5 311 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 NABP2Q9BQ15 211 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 OR51M1Q9H341 326 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 NCBP2LA6PVI3 153 aaKnown RBP10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 REG1AP05451 166 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 CRYBB3P26998 211 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 RANP62826 216 aaKnown RBP10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 ARHGAP21Q5T5U3 1957 aa10.27□□□□□ -0.77
TM9SF4-201ENST00000217315 C5orf52A6NGY3 159 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 GCHFRP30047 84 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 TPPP2P59282 170 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 LYZP61626 148 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 BSPH1Q075Z2 132 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 C10orf113Q5VZT2 155 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 RPRMLQ8N4K4 120 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 IGKV1D-17A0A075B6S4 117 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 A0A087X0M5 115 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 TRAV1-1A0A0B4J248 108 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 A0A1B0GX30 115 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 PGPEP1LA6NFU8 196 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 ETFRF1Q6IPR1 90 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 S100A7AQ86SG5 101 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 PRR7Q8TB68 274 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 DIRC2Q96SL1 478 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 TRAV3A0A0B4J244 114 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 H0Y8G0 127 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 GATCO43716 136 aaKnown RBP10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BKO60814 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BJP06899 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BOP23527 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BBP33778 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BDP58876 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BCP62807 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST2H2BEQ16778 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 MBNL2Q5VZF2 373 aaKnown RBP10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 FAM90A1Q86YD7 464 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 FAM57AQ8TBR7 257 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BHQ93079 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BNQ99877 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 HIST1H2BMQ99879 126 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 SPRY4Q9C004 299 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 PRO3102Q9H379 93 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 SRD5A3Q9H8P0 318 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 SEBOXQ9HB31 216 aaPredicted RBP10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 PARD6AQ9NPB6 346 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 WDR83OSQ9Y284 106 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 TNCP24821 2201 aa10.26□□□□□ -0.77
TM9SF4-201ENST00000217315 A0A1B0GW64 132 aa10.25□□□□□ -0.77
TM9SF4-201ENST00000217315 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.25□□□□□ -0.77
TM9SF4-201ENST00000217315 HSBP1O75506 76 aa10.25□□□□□ -0.77
TM9SF4-201ENST00000217315 PQLC2Q6ZP29 291 aa10.25□□□□□ -0.77
TM9SF4-201ENST00000217315 PDPNQ86YL7 162 aa10.25□□□□□ -0.77
TM9SF4-201ENST00000217315 OR5AU1Q8NGC0 362 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms