RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 GpnmbQ99P91 574 aa12.34□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Wdr5bQ9D7H2 328 aa12.34□□□□□ -0.43
Col3a1-201ENSMUST00000087883 PrndQ9QUG3 179 aa12.34□□□□□ -0.43
Col3a1-201ENSMUST00000087883 DptQ9QZZ6 201 aa12.34□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Mgst2A2RST1 147 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Tmem240B2RWJ3 173 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Cd74P04441 279 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Rab24P35290 203 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Olfr101Q920Z0 308 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Cmtm2bQ9DAC0 210 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Ctnnbip1Q9JJN6 81 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Nup98Q6PFD9 1816 aaKnown RBP12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gm29776A0A286YEC0 699 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Lgals9O08573 353 aaKnown RBP12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Cox5bP19536 128 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Hspb7P35385 169 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Tmem71Q149F5 287 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Dhrs2Q149L0 282 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Trat1Q3UU67 187 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Olfr1448Q8VFX1 314 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Mrpl18Q9CQL5 180 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gm10666K7N6B8 321 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Vmn1r121K7N6J4 314 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Prss50Q8BLH5 439 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Scmh1Q8K214 706 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Plppr2Q8VCY8 343 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Neurl1Q923S6 574 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 ClpsQ9CQC2 113 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gng10Q9CXP8 68 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Prss47A0A0N4SVQ0 395 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gm5108J3QP01 101 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 TspoP50637 169 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Klhdc2Q4G5Y1 406 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Plppr5Q8BJ52 321 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Sfxn4Q925N1 313 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Tnfrsf12aQ9CR75 129 aa12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Srsf10Q9R0U0 262 aaKnown RBP12.33□□□□□ -0.44
Col3a1-201ENSMUST00000087883 A630095N17RikJ3KMM7 116 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 G6pcP35576 357 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Wnt10aP70701 417 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Thap4Q6P3Z3 569 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Pgam5Q8BX10 288 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Rhbdd2Q8VEK2 361 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Ear10Q923L6 156 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Nus1Q99LJ8 297 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Rnps1Q99M28 305 aaKnown RBP12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Shisa5Q9D7I0 235 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 DeddQ9Z1L3 318 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Actl6aQ9Z2N8 429 aaKnown RBP12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Ighv1-13A0A075B5I0 98 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gm7714E9Q079 131 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 EomesO54839 707 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Siva1O54926 175 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Rab42Q0PD08 215 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 SelenohQ3UQA7 116 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Cd99l2Q8BIF0 237 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Tmem144Q8VEH0 348 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Olfr577Q8VH11 312 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Tmem208Q9CR96 173 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Opn4Q9QXZ9 521 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Ighv5-12A0A075B5Q4 117 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 CymB7ZWD6 379 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Scgb1b3J3QJY4 93 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Olfr1230Q8VG58 305 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Chac2Q9CQG1 178 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 NubplQ9CWD8 319 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Klf9O35739 244 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Nkx3-1P97436 237 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Olfr1383Q7TQT2 311 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gm9837Q8C607 126 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Lysmd2Q9D7V2 215 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 NpffQ9WVA8 114 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Unc13cQ8K0T7 2210 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Olfr1191-ps1A0A1L1STD5 311 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Defa37K9J724 93 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Defa5P28312 93 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Xrcc3Q9CXE6 349 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Defb5Q9EPV9 64 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Eif3gQ9Z1D1 320 aaKnown RBP12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gm26920S4R2A5 56 aa12.32□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Mdga2P60755 949 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Serinc5Q8BHJ6 461 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Phf13Q8K2W6 296 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Aqp3Q8R2N1 292 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Olfr1330Q8VEY6 315 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Olfr1462Q8VFW3 307 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Abhd14aQ922Q6 247 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Ssmem1Q9D9Y8 244 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Scn11aQ9R053 1765 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Zfp974Q3UVF6 752 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 GcsamQ6RFH4 181 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Hamp2Q80T19 83 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 TxnipQ8BG60 397 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Cds2Q99L43 444 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Tmem178aQ9CZ16 297 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Ighv7-1A0A075B5S2 121 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gm13083A2AGW5 501 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Gfra3O35118 397 aa12.31□□□□□ -0.44
Col3a1-201ENSMUST00000087883 Edil3O35474 480 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 63.1 ms