RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 TMEM42Q69YG0 159 aa14.1□□□□□ -0.15
CACNA1A-258ENST00000638029 EP300Q09472 2414 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-258ENST00000638029 MRPL30Q8TCC3 161 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 EWSR1Q01844 656 aaKnown RBP eCLIP14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 PLPPR5Q32ZL2 321 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 CBLN3Q6UW01 205 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 CYB561D1Q8N8Q1 229 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 SLIRPQ9GZT3 109 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 UBR3Q6ZT12 1888 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 ABHD12Q8N2K0 398 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 TMEM249Q2WGJ8 235 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 C14orf144Q96I85 54 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 TMEFF2Q9UIK5 374 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 PPYP01298 95 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 INO80CQ6PI98 192 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 UCP2P55851 309 aa14.09□□□□□ -0.15
CACNA1A-258ENST00000638029 OR2H1Q9GZK4 316 aa14.08□□□□□ -0.15
CACNA1A-258ENST00000638029 SLC52A3Q9NQ40 469 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 SCN4AP35499 1836 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 LSM6P62312 80 aaKnown RBP14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 NRTNQ99748 197 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 PGLYRP3Q96LB9 341 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 SPSB2Q99619 263 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 A8MWL6 223 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 BGLAPP02818 100 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 ACSF3Q4G176 576 aaPredicted RBP14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 OR10J3Q5JRS4 329 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 SLC25A34Q6PIV7 304 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 KIR3DL3Q8N743 410 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 ARL14EPLP0DKL9 152 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 SSBP3Q9BWW4 388 aaPredicted RBP14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 KCNK7Q9Y2U2 307 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 WNK3Q9BYP7 1800 aa14.08□□□□□ -0.16
CACNA1A-258ENST00000638029 FOLR2P14207 255 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 LHX2P50458 406 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 GOLT1AQ6ZVE7 132 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 PARP14Q460N5 1801 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 C10orf35Q96D05 121 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 CALYQ9NYX4 217 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 PAX2Q02962 417 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 GBF1Q92538 1859 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 CLEC19AQ6UXS0 136 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 METRNQ9UJH8 293 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 PTPRFP10586 1907 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 ASPDHA6ND91 283 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 INS-IGF2F8WCM5 200 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 HRKO00198 91 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 FOXH1O75593 365 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 INSP01308 110 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 P2RY1P47900 373 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 CXorf51AA0A1B0GTR3 108 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 SEC11BP0C7V7 166 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 GATD1Q8NB37 220 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 SCNM1Q9BWG6 230 aa14.07□□□□□ -0.16
CACNA1A-258ENST00000638029 RUNX1Q01196 453 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 S100A7L2Q5SY68 101 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 NIT1Q86X76 327 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 C8orf46Q8TAG6 207 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 IGHV1-69-2A0A0G2JMI3 117 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 SRSF4Q08170 494 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 TSPAN7P41732 249 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 SCAND1P57086 179 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 FAM71F2Q6NXP2 309 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 HBZP02008 142 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 CISD3P0C7P0 127 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 MOSP00540 346 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 LINC00596Q86U02 117 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 GRIFINA4D1Z8 144 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 LILRA1O75019 489 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 PMCHL1Q16048 86 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 OR4D11Q8NGI4 311 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 SF3B5Q9BWJ5 86 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 MEGF9Q9H1U4 602 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 CLDN16Q9Y5I7 305 aa14.06□□□□□ -0.16
CACNA1A-258ENST00000638029 NFAM1Q8NET5 270 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 MRAPQ8TCY5 172 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 LIPT2A6NK58 231 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 CTGFP29279 349 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 ANXA2RQ3ZCQ2 193 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 C1orf122Q6ZSJ8 110 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 KLK2P20151 261 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 OR10S1Q8NGN2 331 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 MARVELD1Q9BSK0 173 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 GGACTQ9BVM4 153 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 SPCS1Q9Y6A9 102 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 IGLV3-16A0A075B6K0 115 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 IGHV3-73A0A0B4J1V6 119 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 RTN4RL2Q86UN3 420 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 PEF1Q9UBV8 284 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 HOXA6P31267 233 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 WDR82Q6UXN9 313 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 FNDC4Q9H6D8 234 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 DRD3P35462 400 aa14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 ZNF625Q96I27 306 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-258ENST00000638029 PSG9Q00887 426 aa14.04□□□□□ -0.16
CACNA1A-258ENST00000638029 MIC13Q5XKP0 118 aa14.04□□□□□ -0.16
CACNA1A-258ENST00000638029 C9orf62Q8N4C0 152 aa14.04□□□□□ -0.16
CACNA1A-258ENST00000638029 ABHD1Q96SE0 405 aa14.04□□□□□ -0.16
CACNA1A-258ENST00000638029 A0A1W2PQM1 296 aa14.04□□□□□ -0.16
CACNA1A-258ENST00000638029 CLPSL1A2RUU4 121 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms