RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 S100A9P06702 114 aaKnown RBP4.26□□□□□ -1.73
SHMT1-211ENST00000618902 HOXB5P09067 269 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 GZMHP20718 246 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 VDAC1P21796 283 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 UCP1P25874 307 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 SNCAP37840 140 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 DYNLT3P51808 116 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 EDDM3BP56851 147 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 HERV-K104P61576 105 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 SLC9A3R2Q15599 337 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 C17orf58Q2M2W7 97 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 ANKRD55Q3KP44 614 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 Q3ZCU0 254 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 MINOS1Q5TGZ0 78 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 PRAMEF5Q5TYX0 476 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 GGNBP1Q5YKI7 109 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 C12orf54Q6X4T0 127 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 BRD3OSQ6XYD6 125 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF497Q6ZNH5 498 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 VMO1Q7Z5L0 202 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 C1QL4Q86Z23 238 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 BEND2Q8NDZ0 799 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 OR10G4Q8NGN3 311 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 OR13D1Q8NGV5 346 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 OR4F5Q8NH21 305 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 UBALD1Q8TB05 177 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 MRPL30Q8TCC3 161 aaKnown RBP4.26□□□□□ -1.73
SHMT1-211ENST00000618902 PCNPQ8WW12 178 aaKnown RBP4.26□□□□□ -1.73
SHMT1-211ENST00000618902 TMED6Q8WW62 240 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 CORO2AQ92828 525 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 MALSU1Q96EH3 234 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 HDHD3Q9BSH5 251 aaPredicted RBP4.26□□□□□ -1.73
SHMT1-211ENST00000618902 PCGF1Q9BSM1 259 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF747Q9BV97 191 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 SLC35B3Q9H1N7 401 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 HRH4Q9H3N8 390 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 GAL3ST2Q9H3Q3 398 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 LINC00574Q9H8X3 128 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM242Q9NWH2 141 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 OR6C3Q9NZP0 311 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 MINOS1-NBL1R4GNA1 71 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 A0A087WWC5 75 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 C3orf85A0A1B0GTC6 90 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 A0A1B0GU03 582 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 OOSP1A8MZH6 123 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 GPR31O00270 319 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 NPFFO15130 113 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 ADAP1O75689 374 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 IFNA17P01571 189 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 S100A6P06703 90 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 OR8U8P0C7N1 319 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 RCC1P18754 421 aaPredicted RBP4.25□□□□□ -1.73
SHMT1-211ENST00000618902 OMGP23515 440 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 COX7A1P24310 79 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 SSTR5P35346 364 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 CEACAM3P40198 252 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 NKX2-1P43699 371 aaPredicted RBP4.25□□□□□ -1.73
SHMT1-211ENST00000618902 IER3P46695 156 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 LGALS4P56470 323 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 TAS2R30P59541 319 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 S100A10P60903 97 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 SERF2P84101 59 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 ID3Q02535 119 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 MSMO1Q15800 293 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 KRBOX4Q5JUW0 171 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 FAM74A1Q5RGS3 127 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 SLC35E4Q6ICL7 350 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 CCDC144NLQ6NUI1 221 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 TRAT1Q6PIZ9 186 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 C16orf82Q7Z2V1 217 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 C6orf201Q7Z4U5 140 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF695Q8IW36 515 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 DYNAPQ8N1N2 210 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 OR2C3Q8N628 320 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 TCTEX1D1Q8N7M0 179 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 SIGLECL1Q8N7X8 197 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 C3orf56Q8N813 242 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 ZBTB34Q8NCN2 500 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 OR11H6Q8NGC7 330 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 RFESDQ8TAC1 157 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 MRGPRDQ8TDS7 321 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 LHX4Q969G2 390 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 RRNAD1Q96FB5 475 aaKnown RBP4.25□□□□□ -1.73
SHMT1-211ENST00000618902 BTF3L4Q96K17 158 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 RAB40CQ96S21 281 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 SSX3Q99909 188 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 FAAP24Q9BTP7 215 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 PARD6GQ9BYG4 376 aaPredicted RBP4.25□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM222Q9H0R3 208 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 ESM1Q9NQ30 184 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 OR2S2Q9NQN1 319 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 SLC2A9Q9NRM0 540 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 OR5AC2Q9NZP5 309 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 ZNRD1Q9P1U0 126 aa4.25□□□□□ -1.73
SHMT1-211ENST00000618902 NOTCH3Q9UM47 2321 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 IGKV1D-8A0A087WSZ0 117 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 A0A087X0M5 115 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 TRGV10A0A0A0MS01 117 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 A0A0U1RQK1 487 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 KBTBD11-OT1A0A1B0GTJ5 212 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms