RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TCF19Q9Y242 345 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 C15orf61A6NNL5 157 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 COLCA2A8K830 154 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 HMGB3O15347 200 aaKnown RBP11.17□□□□□ -0.62
NEK3-205ENST00000610828 NDUFB3O43676 98 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 LY86O95711 162 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 PLAUP00749 431 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 BCL2P10415 239 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 GRNP28799 593 aaKnown RBP11.17□□□□□ -0.62
NEK3-205ENST00000610828 KLRB1Q12918 225 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 RHEBQ15382 184 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 LRRC10Q5BKY1 277 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 FFAR4Q5NUL3 377 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 TMEM200BQ69YZ2 307 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 ZNF429Q86V71 674 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 LHX4Q969G2 390 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 SLC25A22Q9H936 323 aa11.17□□□□□ -0.62
NEK3-205ENST00000610828 SMCO3A2RU48 225 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 H3BQ15 152 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 RRHO14718 337 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 CD1BP29016 333 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 VDAC2P45880 294 aaPredicted RBP11.16□□□□□ -0.62
NEK3-205ENST00000610828 PDLIM3Q53GG5 364 aaPredicted RBP11.16□□□□□ -0.62
NEK3-205ENST00000610828 HEPN1Q6WQI6 88 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 ABHD12Q8N2K0 398 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 C15orf54Q8N8G6 183 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 OR10G4Q8NGN3 311 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 OR10G9Q8NGN4 311 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 OR10G7Q8NGN6 311 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 ARFGEF3Q5TH69 2177 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 HRASP01112 189 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 IGKV1-16P04430 117 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 CRYBA1P05813 215 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 SLC35D1Q9NTN3 355 aa11.16□□□□□ -0.62
NEK3-205ENST00000610828 CISD1Q9NZ45 108 aaKnown RBP11.16□□□□□ -0.62
NEK3-205ENST00000610828 B9A039 149 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 DVL1O14640 695 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 MBP02144 154 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 CHRNB4P30926 498 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 RAB11AP62491 216 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 RTL8BQ17RB0 113 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 AVPI1Q5T686 147 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 OR10A7Q8NGE5 316 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 OR13D1Q8NGV5 346 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 CTSZQ9UBR2 303 aa11.15□□□□□ -0.62
NEK3-205ENST00000610828 FOXA2Q9Y261 457 aaPredicted RBP11.15□□□□□ -0.62
NEK3-205ENST00000610828 IGHV1-69-2A0A0G2JMI3 117 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 IFNA4P05014 189 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 MDKP21741 143 aaPredicted RBP11.14□□□□□ -0.63
NEK3-205ENST00000610828 ZFP82Q8N141 532 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 ST6GALNAC3Q8NDV1 305 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 RAB39BQ96DA2 213 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 TMEM14BQ9NUH8 114 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 CTXND1A0A1B0GTU2 59 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 A0A1W2PPE2 198 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
NEK3-205ENST00000610828 IFNA1P01562 189 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 MYOD1P15172 320 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 PAX6P26367 422 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 HSPE1P61604 102 aaKnown RBP11.14□□□□□ -0.63
NEK3-205ENST00000610828 EFNB3Q15768 340 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 C2CD4CQ8TF44 421 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 HINT2Q9BX68 163 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 ATRXP46100 2492 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 NBASA2RRP1 2371 aa11.14□□□□□ -0.63
NEK3-205ENST00000610828 A0A1W2PPH5 198 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 DEFA4P12838 97 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 RAB13P51153 203 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 CTAG1AP78358 180 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 ZNF833PQ6ZTB9 187 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 ENY2Q9NPA8 101 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 OR51B2Q9Y5P1 312 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 REG1BP48304 166 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 DLK1P80370 383 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 MUC15Q8N387 334 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 OR10X1Q8NGY0 326 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 MRPL20Q9BYC9 149 aaKnown RBP11.13□□□□□ -0.63
NEK3-205ENST00000610828 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
NEK3-205ENST00000610828 TMPRSS5Q9H3S3 457 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 TUBA4BQ9H853 241 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 VAX2Q9UIW0 290 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 LRBAP50851 2863 aa11.13□□□□□ -0.63
NEK3-205ENST00000610828 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
NEK3-205ENST00000610828 OPN1MWP04001 364 aa11.12□□□□□ -0.63
NEK3-205ENST00000610828 OPN1MW2P0DN77 364 aa11.12□□□□□ -0.63
NEK3-205ENST00000610828 OPN1MW3P0DN78 364 aa11.12□□□□□ -0.63
NEK3-205ENST00000610828 LOXP28300 417 aaPredicted RBP11.12□□□□□ -0.63
NEK3-205ENST00000610828 TAGLN2P37802 199 aaKnown RBP11.12□□□□□ -0.63
NEK3-205ENST00000610828 FBXL19-AS1Q494R0 122 aa11.12□□□□□ -0.63
NEK3-205ENST00000610828 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
NEK3-205ENST00000610828 RBMS3Q6XE24 437 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms