RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MAFIPQ8WZ33 124 aa13.44□□□□□ -0.26
SHKBP1-227ENST00000602011 ATG5Q9H1Y0 275 aa13.44□□□□□ -0.26
SHKBP1-227ENST00000602011 FBXL7Q9UJT9 491 aa13.44□□□□□ -0.26
SHKBP1-227ENST00000602011 OR2J3O76001 311 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 PRH1P02810 166 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 CBLN1P23435 193 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 RPL27AP46776 148 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 DEFA5Q01523 94 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 MSMO1Q15800 293 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 GUCA2BQ16661 112 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 DEFB125Q8N687 156 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 MARC2Q969Z3 335 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 ST6GALNAC5Q9BVH7 336 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 NDUFB11Q9NX14 153 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 DMRT1Q9Y5R6 373 aa13.43□□□□□ -0.26
SHKBP1-227ENST00000602011 TRAV25A0A0B4J276 109 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 RBMY1BA6NDE4 496 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 RBMY1EA6NEQ0 496 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 MRPS14O60783 128 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 KBTBD11O94819 623 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 OR2C1O95371 312 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 CD7P09564 240 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 RBMY1DP0C7P1 496 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 ZNF735P0CB33 412 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 OR10A3P58181 314 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 PUSL1Q8N0Z8 303 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 EEF1AKMT3Q96AZ1 226 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 CXorf58Q96LI9 332 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 FYTTD1Q96QD9 318 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 FAM110AQ9BQ89 295 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 Q9H521 79 aa13.42□□□□□ -0.26
SHKBP1-227ENST00000602011 IGKV1D-8A0A087WSZ0 117 aa13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 TRBV7-1A0A0A6YYK4 115 aa13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 TEX22C9J3V5 150 aa13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 PSMB6P28072 239 aa13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 ARL3P36405 182 aa13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 ZNF57Q68EA5 555 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 TPRA1Q86W33 373 aa13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 MFSD4AQ8N468 514 aa13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 ZBTB34Q8NCN2 500 aa13.41□□□□□ -0.26
SHKBP1-227ENST00000602011 NOTOA8MTQ0 251 aa13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 A8MWP6 167 aa13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 CYB5BO43169 146 aa13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 IL6RP08887 468 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 FGF2P09038 288 aa13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 NFYAP23511 347 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 TCTEX1D2Q8WW35 142 aa13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 SRSF8Q9BRL6 282 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 THYN1Q9P016 225 aa13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 ANXA10Q9UJ72 324 aa13.4□□□□□ -0.26
SHKBP1-227ENST00000602011 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 PPP5D1E7EU14 171 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 IGLV2-14P01704 120 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 DEFA4P12838 97 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 CTRB1P17538 263 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 FGF9P31371 208 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 ELLP55199 621 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 GNG2P59768 71 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 RPL30P62888 115 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 RPL8P62917 257 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 C10orf55Q5SWW7 151 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 CTRB2Q6GPI1 263 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 FANCD2OSQ96PS1 177 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 BET1LQ9NYM9 111 aa13.39□□□□□ -0.27
SHKBP1-227ENST00000602011 LOC102724200A0A096LPH7 203 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 ZNF320A2RRD8 509 aa13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 J3QRK9 145 aa13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 RBFOX2O43251 390 aaKnown RBP eCLIP13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 SCAND1P57086 179 aa13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 EIF4EBP1Q13541 118 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 CLEC19AQ6UXS0 136 aa13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 UXS1Q8NBZ7 420 aa13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 OR52B4Q8NGK2 314 aa13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 GGTLC1Q9BX51 225 aa13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 MRPL27Q9P0M9 148 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 SPATA2Q9UM82 520 aa13.38□□□□□ -0.27
SHKBP1-227ENST00000602011 NDUFB8O95169 186 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 CLEC3BP05452 202 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 C8orf88P0DMB2 117 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 MYOD1P15172 320 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 HLA-GP17693 338 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 ARPC4P59998 168 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 C22orf42Q6IC83 251 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 VKORC1L1Q8N0U8 176 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 CD300LFQ8TDQ1 290 aa13.37□□□□□ -0.27
SHKBP1-227ENST00000602011 TMEM213A2RRL7 107 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 HLA-AP01891 365 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 TAS2R31P59538 309 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 OR2B11Q5JQS5 317 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 THOC7Q6I9Y2 204 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 RBPMS2Q6ZRY4 209 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 HSD17B13Q7Z5P4 300 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 SLC38A6Q8IZM9 456 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 TMEM61Q8N0U2 210 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 BORCS5Q969J3 196 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 CCDC140Q96MF4 163 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 ATP6V0BQ99437 205 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms