RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TEX22C9J3V5 150 aa17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 HRASP01112 189 aa17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 PRH1P02810 166 aa17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 IL6RP08887 468 aaPredicted RBP17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 INSL3P51460 131 aa17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 CATR1Q13166 79 aa17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 MZT2AQ6P582 158 aa17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 TTC9CQ8N5M4 171 aa17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 PRR25Q96S07 402 aa17.15■□□□□ 0.34
GTF2F1-204ENST00000594965 ANKRD34BA5PLL1 514 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 HMX3A6NHT5 357 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 MPPED1O15442 326 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 HPRT1P00492 218 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 MYOD1P15172 320 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 POU2AF1Q16633 256 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 OR4A47Q6IF82 309 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 ZNF343Q6P1L6 599 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 ACSM6Q6P461 480 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 ZNF429Q86V71 674 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 OR51H1Q8NH63 302 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 AP3S1Q92572 193 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 USMG5Q96IX5 58 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 SPIN2AQ99865 258 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 SPIN2BQ9BPZ2 258 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 RANGRFQ9HD47 186 aaPredicted RBP17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 BET1LQ9NYM9 111 aa17.14■□□□□ 0.33
GTF2F1-204ENST00000594965 TRBV9A0A0B4J1U6 114 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 FAM25AB3EWG3 89 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 FAM25CB3EWG5 89 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 FAM25GB3EWG6 89 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 TRBV12-3P01733 135 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 ZNF735P0CB33 412 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 MAS1LP35410 378 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 TAS2R31P59538 309 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 SPCS2Q15005 226 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 AADACL3Q5VUY0 350 aa17.13■□□□□ 0.33
GTF2F1-204ENST00000594965 PGLYRP1O75594 196 aaPredicted RBP17.12■□□□□ 0.33
GTF2F1-204ENST00000594965 RPL27AP46776 148 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-204ENST00000594965 OR6F1Q8NGZ6 308 aa17.12■□□□□ 0.33
GTF2F1-204ENST00000594965 BORCS5Q969J3 196 aa17.12■□□□□ 0.33
GTF2F1-204ENST00000594965 AKIP1Q9NQ31 210 aa17.12■□□□□ 0.33
GTF2F1-204ENST00000594965 LSM4Q9Y4Z0 139 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-204ENST00000594965 SORL1Q92673 2214 aa17.12■□□□□ 0.33
GTF2F1-204ENST00000594965 DNAH9Q9NYC9 4486 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 TRAV3A0A0B4J244 114 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 CGB1A6NKQ9 187 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 SAP30O75446 220 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 S1PR2O95136 353 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 RCVRNP35243 200 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 RPL8P62917 257 aaKnown RBP17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 RHOGP84095 191 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 C19orf35Q6ZS72 473 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 OR4A5Q8NH83 315 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 FYTTD1Q96QD9 318 aaKnown RBP17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 MIXL1Q9H2W2 232 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 PLEKHA2Q9HB19 425 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 EXTL2Q9UBQ6 330 aa17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 PEF1Q9UBV8 284 aaKnown RBP17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 ZNF256Q9Y2P7 627 aaPredicted RBP17.11■□□□□ 0.33
GTF2F1-204ENST00000594965 UPK2O00526 184 aa17.1■□□□□ 0.33
GTF2F1-204ENST00000594965 RLN1P04808 185 aa17.1■□□□□ 0.33
GTF2F1-204ENST00000594965 NQO2P16083 231 aa17.1■□□□□ 0.33
GTF2F1-204ENST00000594965 ZP3P21754 424 aa17.1■□□□□ 0.33
GTF2F1-204ENST00000594965 CLVS1Q8IUQ0 354 aaPredicted RBP17.1■□□□□ 0.33
GTF2F1-204ENST00000594965 AIFM2Q9BRQ8 373 aa17.1■□□□□ 0.33
GTF2F1-204ENST00000594965 SLC2A9Q9NRM0 540 aa17.1■□□□□ 0.33
GTF2F1-204ENST00000594965 ZNF257Q9Y2Q1 563 aa17.1■□□□□ 0.33
GTF2F1-204ENST00000594965 NPIPB5A8MRT5 1133 aa17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 GPR31O00270 319 aa17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 AREGP15514 252 aa17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 HLA-GP17693 338 aa17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 KLF5Q13887 457 aaPredicted RBP17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 RNASE12Q5GAN4 147 aaKnown RBP17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 CD300LFQ8TDQ1 290 aa17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 ABHD1Q96SE0 405 aa17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 HRASLSQ9HDD0 168 aa17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 TMEM140Q9NV12 185 aa17.09■□□□□ 0.33
GTF2F1-204ENST00000594965 FAM223BA6NKX1 122 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 OR2J3O76001 311 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 CRYGCP07315 174 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 F2RP25116 425 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 TSPAN5P62079 268 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 ZNF585BQ52M93 769 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 VAX1Q5SQQ9 334 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 SLC25A42Q86VD7 318 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 FAM223AQ8IWN6 122 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 OR52I2Q8NH67 350 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 B9D2Q9BPU9 175 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 COMMD9Q9P000 198 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 KLK11Q9UBX7 282 aa17.08■□□□□ 0.32
GTF2F1-204ENST00000594965 M0QYG6 137 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 CTDSP2O14595 271 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 RPA2P15927 270 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 PSMB6P28072 239 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 OR2B8PP59922 312 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 ATP5G2Q06055 141 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 EXOSC2Q13868 293 aaKnown RBP17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 KLK9Q2XQG4 91 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 CMTM1Q8IZ96 169 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 NECAP1Q8NC96 275 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms