RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CENPVL3A0A0U1RRI6 287 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 TIMM23O14925 209 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 RBMXL2O75526 392 aaKnown RBP16.75■□□□□ 0.27
PNKP-203ENST00000593946 IGLV2-23P01705 113 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 GATA3P23771 443 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 RPL12P30050 165 aaKnown RBP16.75■□□□□ 0.27
PNKP-203ENST00000593946 PAX9P55771 341 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 RPS16P62249 146 aaKnown RBP16.75■□□□□ 0.27
PNKP-203ENST00000593946 ZNF429Q86V71 674 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 CFHR4Q92496 578 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 RAB40CQ96S21 281 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 QTRT1Q9BXR0 403 aaKnown RBP16.75■□□□□ 0.27
PNKP-203ENST00000593946 GON7Q9BXV9 100 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 AUP1Q9Y679 476 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 ITPR3Q14573 2671 aa16.75■□□□□ 0.27
PNKP-203ENST00000593946 C15orf61A6NNL5 157 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 UBE2KP61086 200 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 CCDC144NLQ6NUI1 221 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 DYNAPQ8N1N2 210 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 C17orf50Q8WW18 174 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 AJUBAQ96IF1 538 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 RBKSQ9H477 322 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 TMEM14BQ9NUH8 114 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 SVEP1Q4LDE5 3571 aa16.74■□□□□ 0.27
PNKP-203ENST00000593946 TSC22D2O75157 780 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 MED6O75586 246 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 CD1BP29016 333 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 SAA4P35542 130 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 LGALS7P47929 136 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 VAMP2P63027 116 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 SSX2Q16385 188 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 PDLIM3Q53GG5 364 aaPredicted RBP16.73■□□□□ 0.27
PNKP-203ENST00000593946 OR2C3Q8N628 320 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 MAPK1IP1LQ8NDC0 245 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 RITA1Q96K30 269 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 LYRM2Q9NU23 88 aaPredicted RBP16.73■□□□□ 0.27
PNKP-203ENST00000593946 FOXA2Q9Y261 457 aaPredicted RBP16.73■□□□□ 0.27
PNKP-203ENST00000593946 WSB1Q9Y6I7 421 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 UPK2O00526 184 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 NPFFO15130 113 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 KBTBD11O94819 623 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 GPR157Q5UAW9 335 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 OR52E5Q8NH55 327 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 MALSU1Q96EH3 234 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 SLA2Q9H6Q3 261 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 C7orf69Q9H7B7 122 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 CACFD1Q9UGQ2 172 aa16.73■□□□□ 0.27
PNKP-203ENST00000593946 BCL2L11O43521 198 aa16.72■□□□□ 0.27
PNKP-203ENST00000593946 ATP6V1G1O75348 118 aa16.72■□□□□ 0.27
PNKP-203ENST00000593946 VENTXO95231 258 aa16.72■□□□□ 0.27
PNKP-203ENST00000593946 PAX6P26367 422 aa16.72■□□□□ 0.27
PNKP-203ENST00000593946 PIP4P2Q8N4L2 257 aa16.72■□□□□ 0.27
PNKP-203ENST00000593946 VSTM2AQ8TAG5 236 aa16.72■□□□□ 0.27
PNKP-203ENST00000593946 PLXNB1O43157 2135 aa16.71■□□□□ 0.27
PNKP-203ENST00000593946 GPR137BO60478 399 aa16.71■□□□□ 0.27
PNKP-203ENST00000593946 IAPPP10997 89 aa16.71■□□□□ 0.27
PNKP-203ENST00000593946 TAS2R30P59541 319 aa16.71■□□□□ 0.27
PNKP-203ENST00000593946 SPCS3P61009 180 aa16.71■□□□□ 0.27
PNKP-203ENST00000593946 SMIM8Q96KF7 97 aa16.71■□□□□ 0.27
PNKP-203ENST00000593946 RNF5Q99942 180 aa16.71■□□□□ 0.27
PNKP-203ENST00000593946 PRNDQ9UKY0 176 aa16.71■□□□□ 0.27
PNKP-203ENST00000593946 TRAV40A0A0B4J280 105 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 IGHV1-69DA0A0B4J2H0 117 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 KANTRA0A1W2PQU2 76 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 IGHV1-69P01742 117 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 IGHV4-31P0DP07 118 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 CAV2P51636 162 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 TMEM249Q2WGJ8 235 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 VMA21Q3ZAQ7 101 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 OR4A5Q8NH83 315 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 TMEM167AQ8TBQ9 72 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 ZDHHC16Q969W1 377 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 ABCA1O95477 2261 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 IGSF23A1L1A6 192 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 FAM24AA6NFZ4 105 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 IFNA17P01571 189 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 RPL23AP62750 156 aaKnown RBP16.7■□□□□ 0.26
PNKP-203ENST00000593946 TMEM252Q8N6L7 170 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 DTD1Q8TEA8 209 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 ARPC5LQ9BPX5 153 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 ZC4H2Q9NQZ6 224 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 ZNF257Q9Y2Q1 563 aa16.7■□□□□ 0.26
PNKP-203ENST00000593946 SLC25A17O43808 307 aa16.69■□□□□ 0.26
PNKP-203ENST00000593946 EWSR1Q01844 656 aaKnown RBP eCLIP16.69■□□□□ 0.26
PNKP-203ENST00000593946 TSNAXQ99598 290 aaKnown RBP16.69■□□□□ 0.26
PNKP-203ENST00000593946 FOXC2Q99958 501 aa16.69■□□□□ 0.26
PNKP-203ENST00000593946 SLC25A31Q9H0C2 315 aa16.69■□□□□ 0.26
PNKP-203ENST00000593946 PSENENQ9NZ42 101 aa16.69■□□□□ 0.26
PNKP-203ENST00000593946 NUP50Q9UKX7 468 aa16.69■□□□□ 0.26
PNKP-203ENST00000593946 TCF19Q9Y242 345 aa16.69■□□□□ 0.26
PNKP-203ENST00000593946 CSPG4Q6UVK1 2322 aa16.69■□□□□ 0.26
PNKP-203ENST00000593946 CEBPZOSA8MTT3 80 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 H3BP45 60 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 J3QLI3 93 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 RGS13O14921 159 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 FGF2P09038 288 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 CNTFRP26992 372 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 HSPE1P61604 102 aaKnown RBP16.68■□□□□ 0.26
PNKP-203ENST00000593946 SPINK9Q5DT21 86 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 SLC51BQ86UW2 128 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms