RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 ETV1P50549 477 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 MFAP2P55001 183 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 DEFA5Q01523 94 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 ARFRP1Q13795 201 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 P2RY14Q15391 338 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 OR2G6Q5TZ20 316 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 C1orf146Q5VVC0 180 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 ZFP1Q6P2D0 407 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 SPSB3Q6PJ21 355 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 MS4A15Q8N5U1 240 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 ZNF485Q8NCK3 441 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 OR6M1Q8NGM8 313 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 OR10J5Q8NHC4 309 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 SETD6Q8TBK2 473 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 AIFM2Q9BRQ8 373 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 OR2D2Q9H210 308 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 VCXQ9H320 206 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 VCX3BQ9H321 246 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 VCX3AQ9NNX9 186 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 AMBNQ9NP70 447 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 DAZ1Q9NQZ3 744 aaKnown RBP6.4□□□□□ -1.38
SMAD4-215ENST00000592911 AK3Q9UIJ7 227 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 MRPS7Q9Y2R9 242 aaKnown RBP6.4□□□□□ -1.38
SMAD4-215ENST00000592911 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.39
SMAD4-215ENST00000592911 LOC100130705A0A1B0GUX0 176 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 SAC3D1A6NKF1 404 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 FOXI3A8MTJ6 420 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-215ENST00000592911 K7EMT4 169 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 FABP7O15540 132 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 ATP5HO75947 161 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 ATP6V1G2O95670 118 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 CRYZL1O95825 349 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 SAA1P0DJI8 122 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-215ENST00000592911 CTRB1P17538 263 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 QRFPP83859 136 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 UNC119Q13432 240 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 LGALS9BQ3B8N2 356 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 ODF3L2Q3SX64 289 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 LIPKQ5VXJ0 399 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 CTRB2Q6GPI1 263 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 THOC7Q6I9Y2 204 aaKnown RBP6.39□□□□□ -1.39
SMAD4-215ENST00000592911 CLEC19AQ6UXS0 136 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 Q6ZS49 121 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 C5orf24Q7Z6I8 188 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 APH1BQ8WW43 257 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 CACNG8Q8WXS5 425 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 TMEM190Q8WZ59 177 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 GGHQ92820 318 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 ORAI1Q96D31 301 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 CMSS1Q9BQ75 279 aaKnown RBP6.39□□□□□ -1.39
SMAD4-215ENST00000592911 C9orf16Q9BUW7 83 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 RNF126Q9BV68 326 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 OR51E2Q9H255 320 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 PRELID3BQ9Y3B1 194 aa6.39□□□□□ -1.39
SMAD4-215ENST00000592911 IGLV11-55A0A075B6I3 123 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 IGKV1-6A0A0C4DH72 117 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 EFCAB10A6NFE3 127 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 PRSS29PA6NIE9 313 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 TEX22C9J3V5 150 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 NDUFA4O00483 81 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 MRPS14O60783 128 aaKnown RBP6.38□□□□□ -1.39
SMAD4-215ENST00000592911 KBTBD11O94819 623 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 LALBAP00709 142 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 P0DMU3 169 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 FAM231AP0DMU4 169 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 FAM231CP0DMU5 169 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 CD36P16671 472 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 PTBP1P26599 531 aaKnown RBP eCLIP6.38□□□□□ -1.393e-11■■■■□ 21.8
SMAD4-215ENST00000592911 RPL27AP46776 148 aaKnown RBP6.38□□□□□ -1.39
SMAD4-215ENST00000592911 NANOS2P60321 138 aaKnown RBP6.38□□□□□ -1.39
SMAD4-215ENST00000592911 MRPS15P82914 257 aaKnown RBP6.38□□□□□ -1.39
SMAD4-215ENST00000592911 ZNF585BQ52M93 769 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 ANKRD39Q53RE8 183 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 PVRIGQ6DKI7 326 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 HSD17B13Q7Z5P4 300 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-215ENST00000592911 CEACAM19Q7Z692 300 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 CENPSQ8N2Z9 138 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 OR56B1Q8NGI3 324 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 OR4A5Q8NH83 315 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 TMEM167AQ8TBQ9 72 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 VN1R17PQ8TDU5 208 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 TMEM80Q96HE8 168 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 LPAR5Q9H1C0 372 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 SMPD3Q9NY59 655 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-215ENST00000592911 FBXL17Q9UF56 701 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 HSPG2P98160 4391 aa6.38□□□□□ -1.39
SMAD4-215ENST00000592911 PKD1P98161 4303 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 TRAV10A0A0B4J240 114 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 C15orf62A8K5M9 175 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 WBP4O75554 376 aaKnown RBP6.37□□□□□ -1.39
SMAD4-215ENST00000592911 CDK2AP2O75956 126 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 HLA-AP01891 365 aaKnown RBP6.37□□□□□ -1.39
SMAD4-215ENST00000592911 AMBPP02760 352 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 PRH1P02810 166 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 CLEC3BP05452 202 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 APELAP0DMC3 54 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 EDN2P20800 178 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 LINC00205P59089 165 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 ZIK1Q3SY52 487 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-215ENST00000592911 SOHLH1Q5JUK2 328 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms