RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 WFDC10AQ9H1F0 79 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 AUNIPQ9H7T9 357 aa13.07□□□□□ -0.32
RETREG3-210ENST00000590541 FCGR3BO75015 233 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 DEFA5Q01523 94 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 DYRK1AQ13627 763 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 MMD2Q8IY49 270 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 ZBTB34Q8NCN2 500 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 OR5T1Q8NG75 326 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 OR2K2Q8NGT1 345 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 OR4S2Q8NH73 311 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 YIPF6Q96EC8 236 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 SPIN2AQ99865 258 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 SPIN2BQ9BPZ2 258 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 AIFM2Q9BRQ8 373 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 DCUN1D5Q9BTE7 237 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 TINAGL1Q9GZM7 467 aaPredicted RBP13.06□□□□□ -0.32
RETREG3-210ENST00000590541 SRD5A3Q9H8P0 318 aa13.06□□□□□ -0.32
RETREG3-210ENST00000590541 PEF1Q9UBV8 284 aaKnown RBP13.06□□□□□ -0.32
RETREG3-210ENST00000590541 IGKV1D-13A0A0B4J2D9 117 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 MSGN1A6NI15 193 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 ZNF785A8K8V0 405 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 J3QRK9 145 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 XRCC3O43542 346 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 IGLV2-14P01704 120 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 IGKV1-13P0DP09 117 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 KIR2DS2P43631 304 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 TNXAQ16473 311 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 MRGPRG-AS1Q2M3A8 158 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 ZNF343Q6P1L6 599 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
RETREG3-210ENST00000590541 BORCS5Q969J3 196 aa13.05□□□□□ -0.32
RETREG3-210ENST00000590541 RYR1P21817 5038 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 SAA1P0DJI8 122 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-210ENST00000590541 PMS2P11Q13670 270 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 TATDN3Q17R31 274 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 CD300EQ496F6 205 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-210ENST00000590541 UBE2NLQ5JXB2 153 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 SLC25A42Q86VD7 318 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 LAX1Q8IWV1 398 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 MFSD4AQ8N468 514 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 OR5AP2Q8NGF4 316 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 TCTEX1D2Q8WW35 142 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 ACOT12Q8WYK0 555 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 KCTD12Q96CX2 325 aaKnown RBP13.04□□□□□ -0.32
RETREG3-210ENST00000590541 ZNF430Q9H8G1 570 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-210ENST00000590541 SLC2A8Q9NY64 477 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 COA4Q9NYJ1 87 aa13.04□□□□□ -0.32
RETREG3-210ENST00000590541 OR11H12B2RN74 326 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 MPPED1O15442 326 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 OR2A4O95047 310 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 HRASP01112 189 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 FCGR2CP31995 323 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 MAS1LP35410 378 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 RPS19P39019 145 aaKnown RBP13.03□□□□□ -0.32
RETREG3-210ENST00000590541 RPL30P62888 115 aaKnown RBP13.03□□□□□ -0.32
RETREG3-210ENST00000590541 EIF4EBP1Q13541 118 aaPredicted RBP13.03□□□□□ -0.32
RETREG3-210ENST00000590541 RPEL1Q2QD12 228 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 FAM209BQ5JX69 171 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 IDO2Q6ZQW0 420 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 GVQW1Q8N7I0 195 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 ADAD2Q8NCV1 583 aaKnown RBP13.03□□□□□ -0.32
RETREG3-210ENST00000590541 GIMAP1Q8WWP7 306 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 HECTD4Q9Y4D8 3996 aa13.03□□□□□ -0.32
RETREG3-210ENST00000590541 CXorf65A6NEN9 183 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 NUPR2A6NF83 97 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 FAM223BA6NKX1 122 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 PPYP01298 95 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 FAM223AQ8IWN6 122 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 OR13F1Q8NGS4 319 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 SECTM1Q8WVN6 248 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 CMTM3Q96MX0 182 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 OR2A7Q96R45 310 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 OVOL2Q9BRP0 275 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 IFT46Q9NQC8 304 aa13.02□□□□□ -0.33
RETREG3-210ENST00000590541 RBFOX2O43251 390 aaKnown RBP eCLIP13.01□□□□□ -0.33
RETREG3-210ENST00000590541 RBMXL2O75526 392 aaKnown RBP13.01□□□□□ -0.33
RETREG3-210ENST00000590541 KBTBD11O94819 623 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 EWSR1Q01844 656 aaKnown RBP eCLIP13.01□□□□□ -0.33
RETREG3-210ENST00000590541 CATR1Q13166 79 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 TMEM69Q5SWH9 247 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 TTC9CQ8N5M4 171 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 SAMD12Q8N8I0 201 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 TMEM167AQ8TBQ9 72 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 SLC25A46Q96AG3 418 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 TAS2R8Q9NYW2 309 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 PEMTQ9UBM1 199 aa13.01□□□□□ -0.33
RETREG3-210ENST00000590541 DEDDO75618 318 aa13□□□□□ -0.33
RETREG3-210ENST00000590541 OR2B11Q5JQS5 317 aa13□□□□□ -0.33
RETREG3-210ENST00000590541 CEMP1Q6PRD7 247 aaPredicted RBP13□□□□□ -0.33
RETREG3-210ENST00000590541 PUSL1Q8N0Z8 303 aaKnown RBP13□□□□□ -0.33
RETREG3-210ENST00000590541 OR4A5Q8NH83 315 aa13□□□□□ -0.33
RETREG3-210ENST00000590541 CD300LFQ8TDQ1 290 aa13□□□□□ -0.33
RETREG3-210ENST00000590541 SNAPC3Q92966 411 aa13□□□□□ -0.33
RETREG3-210ENST00000590541 SLC5A7Q9GZV3 580 aa13□□□□□ -0.33
RETREG3-210ENST00000590541 CCL28Q9NRJ3 127 aa13□□□□□ -0.33
RETREG3-210ENST00000590541 TRBV9A0A0B4J1U6 114 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 FGF2P09038 288 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 TGFBR1P36897 503 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 BRWD1-AS2P59051 145 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms