RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 BAXQ07812 192 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 PDLIM3Q53GG5 364 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-205ENST00000588745 MINOS1Q5TGZ0 78 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 HIST2H2BCQ6DN03 193 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 LHFPL4Q7Z7J7 247 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 MOB3BQ86TA1 216 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 STX12Q86Y82 276 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 OR8H3Q8N146 312 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 VSTM2AQ8TAG5 236 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 STOML3Q8TAV4 291 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 MBD6Q96DN6 1003 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 SMIM8Q96KF7 97 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 CIB3Q96Q77 187 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-205ENST00000588745 PSENENQ9NZ42 101 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 CACFD1Q9UGQ2 172 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 FOXA2Q9Y261 457 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-205ENST00000588745 TBL2Q9Y4P3 447 aaKnown RBP9.21□□□□□ -0.94
SMAD4-205ENST00000588745 MINOS1-NBL1R4GNA1 71 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 CEBPZOSA8MTT3 80 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 OOSP1A8MZH6 123 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 IFNA17P01571 189 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 IGLV2-23P01705 113 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 MSMBP08118 114 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 TPT1P13693 172 aaKnown RBP9.2□□□□□ -0.94
SMAD4-205ENST00000588745 LGALS7P47929 136 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 HABP2Q14520 560 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-205ENST00000588745 Q5PR19 223 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 CLEC9AQ6UXN8 241 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 OR4A5Q8NH83 315 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 CFHR4Q92496 578 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 BSCL2Q96G97 398 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-205ENST00000588745 C1orf159Q96HA4 380 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 SMIM3Q9BZL3 60 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 TMEM14BQ9NUH8 114 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 UBQLN2Q9UHD9 624 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 NUP50Q9UKX7 468 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 PRNDQ9UKY0 176 aa9.2□□□□□ -0.94
SMAD4-205ENST00000588745 B4DSR2 109 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 TIMM23O14925 209 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 LY86O95711 162 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 SULT1A1P50225 295 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 LGALS4P56470 323 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 EIF5AP63241 154 aaKnown RBP9.19□□□□□ -0.94
SMAD4-205ENST00000588745 NHLH2Q02577 135 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 TMEM267Q0VDI3 215 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-205ENST00000588745 VMA21Q3ZAQ7 101 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 SPINK9Q5DT21 86 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 RPL7L1Q6DKI1 246 aaKnown RBP9.19□□□□□ -0.94
SMAD4-205ENST00000588745 CCDC144NLQ6NUI1 221 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 TMEM167AQ8TBQ9 72 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 TCF19Q9Y242 345 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 ZNF257Q9Y2Q1 563 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 HILPDAQ9Y5L2 63 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 OR51B2Q9Y5P1 312 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 CENPEQ02224 2701 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 VPS13CQ709C8 3753 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 POLQO75417 2590 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 ABCA12Q86UK0 2595 aa9.19□□□□□ -0.94
SMAD4-205ENST00000588745 SLC25A17O43808 307 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 CST7O76096 145 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 VENTXO95231 258 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 FGF2P09038 288 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 CD1BP29016 333 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 HOXA1P49639 335 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-205ENST00000588745 DYNLT3P51808 116 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 HSPE1P61604 102 aaKnown RBP9.18□□□□□ -0.94
SMAD4-205ENST00000588745 LOXL1Q08397 574 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-205ENST00000588745 SPANXN5Q5MJ07 72 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 ALKAL2Q6UX46 152 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 TMEM14EPQ6UXP3 125 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 BAP18Q8IXM2 172 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 STPG2Q8N412 459 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 OR5C1Q8NGR4 320 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 SCARB1Q8WTV0 552 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 PHYHIPLQ96FC7 376 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 OR4C12Q96R67 309 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 CLCC1Q96S66 551 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 TSNAXQ99598 290 aaKnown RBP9.18□□□□□ -0.94
SMAD4-205ENST00000588745 WFDC1Q9HC57 220 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 NAV2Q8IVL1 2488 aa9.18□□□□□ -0.94
SMAD4-205ENST00000588745 TET2Q6N021 2002 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-205ENST00000588745 TRAV20A0A0B4J274 112 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 CENPVL3A0A0U1RRI6 287 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 JTBO76095 146 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 METTL15P1P0C7V9 234 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 MYOD1P15172 320 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 HTR2BP41595 481 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 VDAC2P45880 294 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-205ENST00000588745 RPL8P62917 257 aaKnown RBP9.17□□□□□ -0.94
SMAD4-205ENST00000588745 PRCDQ00LT1 54 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 CLINT1Q14677 625 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 PSG5Q15238 335 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 SSX2Q16385 188 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 PRSS57Q6UWY2 283 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 DYNAPQ8N1N2 210 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 TMEM217Q8N7C4 229 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 LINC01356Q8N9X3 169 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 TEX45Q8NA69 505 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 UBAC2Q8NBM4 344 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms