RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 OR4S2Q8NH73 311 aa12.65□□□□□ -0.38
LINC01842-201ENST00000588275 NRG4Q8WWG1 115 aa12.65□□□□□ -0.38
LINC01842-201ENST00000588275 TECRQ9NZ01 308 aaKnown RBP12.65□□□□□ -0.38
LINC01842-201ENST00000588275 ZNF320A2RRD8 509 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 KBTBD11O94819 623 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 ARL6IP1Q15041 203 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 SSX9Q7RTT3 188 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 VSTM2AQ8TAG5 236 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 NUDCD2Q8WVJ2 157 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 OR2A7Q96R45 310 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 ZC4H2Q9NQZ6 224 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 TAS2R8Q9NYW2 309 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 DMRT1Q9Y5R6 373 aa12.64□□□□□ -0.39
LINC01842-201ENST00000588275 IGKV1D-13A0A0B4J2D9 117 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 NPIPB5A8MRT5 1133 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 SCAF4O95104 1147 aaKnown RBP12.63□□□□□ -0.39
LINC01842-201ENST00000588275 NDUFB8O95169 186 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 HLA-DQB1P01920 261 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 REG1AP05451 166 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 IL6RP08887 468 aaPredicted RBP12.63□□□□□ -0.39
LINC01842-201ENST00000588275 CTXN2P0C2S0 81 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 IGKV1-13P0DP09 117 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 CBLN1P23435 193 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 TBCEQ15813 527 aaPredicted RBP12.63□□□□□ -0.39
LINC01842-201ENST00000588275 ZNF57Q68EA5 555 aaPredicted RBP12.63□□□□□ -0.39
LINC01842-201ENST00000588275 C22orf42Q6IC83 251 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 TMEM61Q8N0U2 210 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 OR52B4Q8NGK2 314 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 CCDC140Q96MF4 163 aa12.63□□□□□ -0.39
LINC01842-201ENST00000588275 TMEM235A6NFC5 223 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 E7EUB6 86 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 LGALS9O00182 355 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 SLC22A5O76082 557 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 DHFRP00374 187 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 IGLV2-14P01704 120 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 DEFA4P12838 97 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 AREGP15514 252 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 GNG2P59768 71 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 FAM106AQ4KMX7 169 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 HACD4Q5VWC8 232 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 EEF1AKMT3Q96AZ1 226 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 CNBD2Q96M20 576 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 HSD17B10Q99714 261 aaKnown RBP12.62□□□□□ -0.39
LINC01842-201ENST00000588275 SLC2A9Q9NRM0 540 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 NDUFB11Q9NX14 153 aa12.62□□□□□ -0.39
LINC01842-201ENST00000588275 TRDV1A0A1B0GX56 115 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 TMEM213A2RRL7 107 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 TNFSF12O43508 249 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 MYOD1P15172 320 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 PSMB6P28072 239 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 CNIH2Q6PI25 160 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 BTNL8Q6UX41 500 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 NR2C2APQ86WQ0 139 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 GPHB5Q86YW7 130 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 PUSL1Q8N0Z8 303 aaKnown RBP12.61□□□□□ -0.39
LINC01842-201ENST00000588275 UXS1Q8NBZ7 420 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 FANCD2OSQ96PS1 177 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 GGTLC1Q9BX51 225 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 MLXQ9UH92 298 aa12.61□□□□□ -0.39
LINC01842-201ENST00000588275 A0A1B0GW64 132 aa12.6□□□□□ -0.39
LINC01842-201ENST00000588275 ZNF735P0CB33 412 aa12.6□□□□□ -0.39
LINC01842-201ENST00000588275 MAS1LP35410 378 aa12.6□□□□□ -0.39
LINC01842-201ENST00000588275 PMS2P11Q13670 270 aa12.6□□□□□ -0.39
LINC01842-201ENST00000588275 MFSD4AQ8N468 514 aa12.6□□□□□ -0.39
LINC01842-201ENST00000588275 DCSTAMPQ9H295 470 aa12.6□□□□□ -0.39
LINC01842-201ENST00000588275 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
LINC01842-201ENST00000588275 LOC102724200A0A096LPH7 203 aaPredicted RBP12.59□□□□□ -0.39
LINC01842-201ENST00000588275 MFSD2BA6NFX1 497 aa12.59□□□□□ -0.39
LINC01842-201ENST00000588275 HRASP01112 189 aa12.59□□□□□ -0.39
LINC01842-201ENST00000588275 RPL8P62917 257 aaKnown RBP12.59□□□□□ -0.39
LINC01842-201ENST00000588275 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
LINC01842-201ENST00000588275 OR4A47Q6IF82 309 aa12.59□□□□□ -0.39
LINC01842-201ENST00000588275 SECTM1Q8WVN6 248 aa12.59□□□□□ -0.39
LINC01842-201ENST00000588275 HRASLSQ9HDD0 168 aa12.59□□□□□ -0.39
LINC01842-201ENST00000588275 ANXA10Q9UJ72 324 aa12.59□□□□□ -0.39
LINC01842-201ENST00000588275 IGHV3-35A0A0C4DH35 117 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 CXorf65A6NEN9 183 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 A8MWP6 167 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 CRYGCP07315 174 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 HIST1H1BP16401 226 aaKnown RBP12.58□□□□□ -0.4
LINC01842-201ENST00000588275 CTRB1P17538 263 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 HLA-GP17693 338 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 GPR183P32249 361 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 BRWD1-AS2P59051 145 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 ARPC4P59998 168 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 EIF4EBP1Q13541 118 aaPredicted RBP12.58□□□□□ -0.4
LINC01842-201ENST00000588275 ANKRD55Q3KP44 614 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 CTRB2Q6GPI1 263 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 ZNF66Q6ZN08 573 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 RBPMS2Q6ZRY4 209 aaKnown RBP12.58□□□□□ -0.4
LINC01842-201ENST00000588275 DAPK2Q9UIK4 370 aa12.58□□□□□ -0.4
LINC01842-201ENST00000588275 NOTOA8MTQ0 251 aa12.57□□□□□ -0.4
LINC01842-201ENST00000588275 SSX5O60225 188 aa12.57□□□□□ -0.4
LINC01842-201ENST00000588275 CLEC3BP05452 202 aa12.57□□□□□ -0.4
LINC01842-201ENST00000588275 TIMM50Q3ZCQ8 353 aa12.57□□□□□ -0.4
LINC01842-201ENST00000588275 ZNF585BQ52M93 769 aa12.57□□□□□ -0.4
LINC01842-201ENST00000588275 UNQ9165/PRO28630Q6UXU0 137 aa12.57□□□□□ -0.4
LINC01842-201ENST00000588275 IZUMO2Q6UXV1 221 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms