RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 A8MXE2 369 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 PPP1R2P9O14990 202 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 NDUFB4O95168 129 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 HPRT1P00492 218 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 HRASP01112 189 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 SLC35B1P78383 322 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 UTF1Q5T230 341 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 WFIKKN1Q96NZ8 548 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 VAX2Q9UIW0 290 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 RAXQ9Y2V3 346 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 SAA2-SAA4A0A096LPE2 208 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 A0A0G2JNJ9 132 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 H3BTX0 84 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 SAA2P0DJI9 122 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-217ENST00000584582 CD24P25063 80 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 DHRS7BQ6IAN0 325 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-217ENST00000584582 SEM1Q6ZVN7 128 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 OR10A7Q8NGE5 316 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 IL22RA2Q969J5 263 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 MALSU1Q96EH3 234 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 CISD1Q9NZ45 108 aaKnown RBP9.38□□□□□ -0.91
TOP3A-217ENST00000584582 Q9UFV3 132 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 MYO9AB2RTY4 2548 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 SRRM5B3KS81 715 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
TOP3A-217ENST00000584582 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-217ENST00000584582 ORM2P19652 201 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 ERVK11-1P61568 191 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 BSXQ3C1V8 233 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 C10orf55Q5SWW7 151 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 C11orf53Q8IXP5 236 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 C15orf54Q8N8G6 183 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 OR10D4PQ8NGN7 298 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 FAM57AQ8TBR7 257 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 OR51B2Q9Y5P1 312 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 CLDN34H7C241 214 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 SLC25A17O43808 307 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 MMP23AO75900 390 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 MT-CO2P00403 227 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 CD3EP07766 207 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 FABP4P15090 132 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 TCL1AP56279 114 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 ICAM4Q14773 271 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 KRTCAP3Q53RY4 240 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 Q6ZSR3 168 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 SLC35E3Q7Z769 313 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 RPP25LQ8N5L8 163 aaKnown RBP9.38□□□□□ -0.91
TOP3A-217ENST00000584582 PRSS33Q8NF86 280 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 SIRT7Q9NRC8 400 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 PXMP4Q9Y6I8 212 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 NAV3Q8IVL0 2385 aa9.38□□□□□ -0.91
TOP3A-217ENST00000584582 MDFIC2A0A1B0GVS7 189 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 ZNF320A2RRD8 509 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 DUTP33316 252 aaKnown RBP9.37□□□□□ -0.91
TOP3A-217ENST00000584582 RAB7AP51149 207 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 MEF2BQ02080 365 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-217ENST00000584582 MLANAQ16655 118 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 HIVEP3Q5T1R4 2406 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 ZNF134P52741 427 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 PSG5Q15238 335 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 ZNF66Q6ZN08 573 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 Q6ZS92 163 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 MRGPRGQ86SM5 289 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 ZBTB34Q8NCN2 500 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 C1orf162Q8NEQ5 155 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-217ENST00000584582 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 PFDN5Q99471 154 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 SFXN3Q9BWM7 321 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 SSUH2Q9Y2M2 353 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 HILPDAQ9Y5L2 63 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 ZNF98A6NK75 572 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 C1QTNF9BB2RNN3 333 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 J3QW42 95 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 ERHP84090 104 aaKnown RBP9.37□□□□□ -0.91
TOP3A-217ENST00000584582 TNXAQ16473 311 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 LRRC75BQ2VPJ9 315 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 KHDC3LQ587J8 217 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 OR10W1Q8NGF6 305 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 CLDND2Q8NHS1 167 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 IGFBPL1Q8WX77 278 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 LURAP1Q96LR2 239 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 RNF115Q9Y4L5 304 aa9.37□□□□□ -0.91
TOP3A-217ENST00000584582 CT45A1Q5HYN5 189 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 CT45A3Q8NHU0 189 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 SLC35E1Q96K37 410 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 NPCDR1Q9BY65 106 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 MBNL3Q9NUK0 354 aaKnown RBP9.36□□□□□ -0.91
TOP3A-217ENST00000584582 S4R3C0 116 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 COL12A1Q99715 3063 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 TANC2Q9HCD6 1990 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 USP9XQ93008 2570 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-217ENST00000584582 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 DPRXA6NFQ7 191 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 IFNL4K9M1U5 179 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 MBP02144 154 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 ATP5G3P48201 142 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 OR4A47Q6IF82 309 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 TGIF2LXQ8IUE1 241 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 ZNF714Q96N38 554 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms