RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 OR13C7P0DN81 318 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 SERF2P84101 59 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 ACSM6Q6P461 480 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 ETV3LQ6ZN32 361 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 CLRN3Q8NCR9 226 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 IFNA10P01566 189 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 RAB2AP61019 212 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 POU2AF1Q16633 256 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 TMEM41BQ5BJD5 291 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 LCN15Q6UWW0 184 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 ABHD12Q8N2K0 398 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 SLC35B3Q9H1N7 401 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 TMEM14BQ9NUH8 114 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 FOXA2Q9Y261 457 aaPredicted RBP15.59■□□□□ 0.09
SMPD3-203ENST00000563226 TIMM9Q9Y5J7 89 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 TNCP24821 2201 aa15.58■□□□□ 0.09
SMPD3-203ENST00000563226 NDUFA2O43678 99 aa15.58■□□□□ 0.09
SMPD3-203ENST00000563226 HOXA1P49639 335 aaPredicted RBP15.58■□□□□ 0.09
SMPD3-203ENST00000563226 FGF8P55075 233 aaPredicted RBP15.58■□□□□ 0.09
SMPD3-203ENST00000563226 AVPI1Q5T686 147 aa15.58■□□□□ 0.09
SMPD3-203ENST00000563226 CENPVQ7Z7K6 275 aaPredicted RBP15.58■□□□□ 0.09
SMPD3-203ENST00000563226 C11orf42Q8N5U0 333 aa15.58■□□□□ 0.09
SMPD3-203ENST00000563226 CLDND2Q8NHS1 167 aa15.58■□□□□ 0.09
SMPD3-203ENST00000563226 J3QR06 171 aa15.58■□□□□ 0.08
SMPD3-203ENST00000563226 HRASP01112 189 aa15.58■□□□□ 0.08
SMPD3-203ENST00000563226 HBE1P02100 147 aa15.58■□□□□ 0.08
SMPD3-203ENST00000563226 MDKP21741 143 aaPredicted RBP15.58■□□□□ 0.08
SMPD3-203ENST00000563226 DLX1P56177 255 aa15.58■□□□□ 0.08
SMPD3-203ENST00000563226 ICAM4Q14773 271 aa15.58■□□□□ 0.08
SMPD3-203ENST00000563226 RTL8BQ17RB0 113 aa15.58■□□□□ 0.08
SMPD3-203ENST00000563226 DHRS7BQ6IAN0 325 aaPredicted RBP15.58■□□□□ 0.08
SMPD3-203ENST00000563226 TRAV1-1A0A0B4J248 108 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 LOC105371267A0A1B0GV96 52 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 IGHV2-70P01814 119 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 IL6RP08887 468 aaPredicted RBP15.57■□□□□ 0.08
SMPD3-203ENST00000563226 FBP1P09467 338 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 PPOXP50336 477 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 AKIRIN2Q53H80 203 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 ZNF841Q6ZN19 808 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 MBD3L1Q8WWY6 194 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 CLCC1Q96S66 551 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 NPCDR1Q9BY65 106 aa15.57■□□□□ 0.08
SMPD3-203ENST00000563226 PRSS46E5RG02 174 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 H0YJW9 148 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 SCAF4O95104 1147 aaKnown RBP15.56■□□□□ 0.08
SMPD3-203ENST00000563226 ZNF787Q6DD87 383 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 RPP25LQ8N5L8 163 aaKnown RBP15.56■□□□□ 0.08
SMPD3-203ENST00000563226 OR10X1Q8NGY0 326 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 ZNF596Q8TC21 504 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 CACNA1AO00555 2505 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 MALRD1Q5VYJ5 2156 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 IGHV1-8P0DP01 117 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 SFTPCP11686 197 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 ATF4P18848 351 aaPredicted RBP15.56■□□□□ 0.08
SMPD3-203ENST00000563226 AKR1C3P42330 323 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 UQCRFS1P47985 274 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 HSPE1P61604 102 aaKnown RBP15.56■□□□□ 0.08
SMPD3-203ENST00000563226 PRB3Q04118 309 aaPredicted RBP15.56■□□□□ 0.08
SMPD3-203ENST00000563226 ZNF506Q5JVG8 444 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 Q8N7P7 452 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 RXFP4Q8TDU9 374 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 OR51B2Q9Y5P1 312 aa15.56■□□□□ 0.08
SMPD3-203ENST00000563226 SPTBN1Q01082 2364 aaKnown RBP15.56■□□□□ 0.08
SMPD3-203ENST00000563226 UPK2O00526 184 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 OPN1MWP04001 364 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 SAA1P0DJI8 122 aaPredicted RBP15.55■□□□□ 0.08
SMPD3-203ENST00000563226 OPN1MW2P0DN77 364 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 OPN1MW3P0DN78 364 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 GNG13Q9P2W3 67 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 H7C2Y5 167 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 SOD3P08294 240 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 SRP19P09132 144 aaKnown RBP15.55■□□□□ 0.08
SMPD3-203ENST00000563226 LINC00311Q8N616 119 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 OR5AN1Q8NGI8 311 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 ST6GALNAC6Q969X2 333 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 NABP2Q9BQ15 211 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 C20orf24Q9BUV8 137 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 HINT2Q9BX68 163 aa15.55■□□□□ 0.08
SMPD3-203ENST00000563226 RALYQ9UKM9 306 aaKnown RBP15.55■□□□□ 0.08
SMPD3-203ENST00000563226 PKD1L2Q7Z442 2459 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 A0A087X0M5 115 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 LOC102723971A0A1B0GUV8 181 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 A0A1B0GX30 115 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 MAP1LC3B2A6NCE7 125 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 LY86O95711 162 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 CD1BP29016 333 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 RPP30P78346 268 aaKnown RBP15.54■□□□□ 0.08
SMPD3-203ENST00000563226 AWAT1Q58HT5 328 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 FFAR4Q5NUL3 377 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 C11orf71Q6IPW1 123 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 C8orf31Q8N9H6 132 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 RAB39BQ96DA2 213 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 MAP1LC3BQ9GZQ8 125 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 SMDT1Q9H4I9 107 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 WDR83OSQ9Y284 106 aa15.54■□□□□ 0.08
SMPD3-203ENST00000563226 TRBV23-1A0A0A0MS06 115 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 SMCO3A2RU48 225 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 HMGB3O15347 200 aaKnown RBP15.53■□□□□ 0.08
SMPD3-203ENST00000563226 APOA2P02652 100 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 DEFA4P12838 97 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms