RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 ZNHIT3Q15649 155 aaPredicted RBP-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 VAMP3Q15836 100 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 MIAQ16674 131 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 DEFB115Q30KQ5 88 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 SPRNQ5BIV9 151 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 TNFAIP8L3Q5GJ75 292 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 C1orf194Q5T5A4 169 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 TTC33Q6PID6 262 aaPredicted RBP-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 ZNF705AQ6ZN79 300 aaPredicted RBP-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 COPS6Q7L5N1 327 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 SSX6Q7RTT6 188 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 GRINAQ7Z429 371 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 MRPL52Q86TS9 123 aaKnown RBP-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 LRRC6Q86X45 466 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 OR2D3Q8NGH3 330 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 OR13C8Q8NGS7 320 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 OR2T4Q8NH00 348 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 OR51H1Q8NH63 302 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 OR10D3Q8NH80 312 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 DTD1Q8TEA8 209 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 SLC37A2Q8TED4 501 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 Q8WTZ3 238 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 RNF133Q8WVZ7 376 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 TMEM239Q8WW34 195 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 MBD3L1Q8WWY6 194 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 ASB13Q8WXK3 278 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 ACOT12Q8WYK0 555 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 AQP3Q92482 292 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 KLK6Q92876 244 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 PPWD1Q96BP3 646 aaKnown RBP-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 TESCQ96BS2 214 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 ERMAPQ96PL5 475 aaPredicted RBP-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 OR7D2Q96RA2 312 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 MED10Q9BTT4 135 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 TMEM109Q9BVC6 243 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 BBS2Q9BXC9 721 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 MROQ9BYG7 248 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 EIF5A2Q9GZV4 153 aaKnown RBP-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 CHST6Q9GZX3 395 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 MS4A6AQ9H2W1 248 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 GOLPH3Q9H4A6 298 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 CST9LQ9H4G1 147 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 CXorf21Q9HAI6 301 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 HRASLSQ9HDD0 168 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 ASCL3Q9NQ33 180 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 C8orf4Q9NR00 106 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 AGPAT3Q9NRZ7 376 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 PARVAQ9NVD7 372 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 MED9Q9NWA0 146 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 EMC3Q9P0I2 261 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 BAIAP2Q9UQB8 552 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 SNX10Q9Y5X0 201 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 SIP14410 1827 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 ECM29Q5VYK3 1845 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 CELSR2Q9HCU4 2923 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 UNC79Q9P2D8 2635 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 KIF15Q9NS87 1388 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 KMT2AQ03164 3969 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 LOC285556D6RIA3 1793 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 POLQO75417 2590 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 ABCA12Q86UK0 2595 aa-0.09□□□□□ -2.42
FOXN3-216ENST00000557496 OBSL1O75147 1896 aa-0.1□□□□□ -2.42
FOXN3-216ENST00000557496 MYO5AQ9Y4I1 1855 aaKnown RBP-0.1□□□□□ -2.42
FOXN3-216ENST00000557496 ABCA1O95477 2261 aa-0.1□□□□□ -2.42
FOXN3-216ENST00000557496 DOCK4Q8N1I0 1966 aa-0.1□□□□□ -2.42
FOXN3-216ENST00000557496 HECW2Q9P2P5 1572 aa-0.1□□□□□ -2.42
FOXN3-216ENST00000557496 MEIKINA0A087WXM9 373 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 TRBV6-7A0A0A0MS04 114 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 TINCRA0A1B0GVN0 87 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 C2orf70A6NJV1 201 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 EVPLLA8MZ36 301 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 F5H5K5 113 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 INMT-MINDY4F8WBC2 141 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 I3L521 148 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 CRXO43186 299 aaPredicted RBP-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 COCHO43405 550 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 ATP8B1O43520 1251 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 CYTH3O43739 400 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 OR2T1O43869 369 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 SCN2BO60939 215 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 UGT2B11O75310 529 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 HMMRO75330 724 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 MT-CO2P00403 227 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 HLA-DRAP01903 254 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 HBZP02008 142 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 CTSDP07339 412 aaPredicted RBP-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 TPM2P07951 284 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 KRT7P08729 469 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 UCHL1P09936 223 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 FAM228BP0C875 321 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 ZNF25P17030 456 aaPredicted RBP-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 FKBP2P26885 142 aaKnown RBP-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 ATP6V0CP27449 155 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 CCR7P32248 378 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 CRATP43155 626 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 MAP2K4P45985 399 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 KCNJ3P48549 501 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 EFNA4P52798 201 aa-0.1□□□□□ -2.43
FOXN3-216ENST00000557496 H2BFSP57053 126 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms