RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 R4GMQ9 66 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 A8MWL6 223 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 MRPL43Q8N983 215 aaKnown RBP7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 SUSD3Q96L08 255 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 CD40P25942 277 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 TMEM50BP56557 158 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 PRSS53Q2L4Q9 553 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 OR10J3Q5JRS4 329 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 UBALD2Q8IYN6 164 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 NCBP2LA6PVI3 153 aaKnown RBP7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 LY6G5CQ5SRR4 150 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 DCAF12Q5T6F0 453 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 Q6ZUT4 128 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 VGLL1Q99990 258 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 WNT16Q9UBV4 365 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 RARRES3Q9UL19 164 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 DYSFO75923 2080 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 TRBV9A0A0B4J1U6 114 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 A0A1W2PQF6 199 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 RGPD2P0DJD1 1756 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 DOCK9Q9BZ29 2069 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 IGHV3-15A0A0B4J1V0 119 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 KIR2DS1A0A191URI9 304 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 KIR2DS1Q14954 304 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 ZNF683Q8IZ20 524 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 LSM10Q969L4 123 aaKnown RBP7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 ZNF501Q96CX3 271 aaPredicted RBP7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 LYRM4Q9HD34 91 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 DUSP13Q9UII6 198 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 TAF1P21675 1872 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 LAMB2P55268 1798 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 TIMP3P35625 211 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 MAGEA5P43359 124 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 CRYBA2P53672 197 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 GAPTQ8N292 157 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 RPEQ96AT9 228 aa7.65□□□□□ -1.18
GTF2A1-203ENST00000553612 MYO7AQ13402 2215 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 MLNRO43193 412 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 NDUFV3P56181 108 aaKnown RBP7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 PMVKQ15126 192 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 SLC48A1Q6P1K1 146 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 ACP7Q6ZNF0 438 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 ZDHHC23Q8IYP9 409 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 ZNF138P52744 262 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 CENPVQ7Z7K6 275 aaPredicted RBP7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 C8orf46Q8TAG6 207 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 SCNM1Q9BWG6 230 aa7.65□□□□□ -1.19
GTF2A1-203ENST00000553612 CACNA1IQ9P0X4 2223 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 CDX4O14627 284 aaPredicted RBP7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 TIAF1O95411 115 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 WNT2P09544 360 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 ZGLP1P0C6A0 271 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 ZNF688P0C7X2 276 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 SRD5A2P31213 254 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 ASPHD1Q5U4P2 390 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 ZNF502Q8TBZ5 544 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 AMELYQ99218 206 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 DEC1Q9P2X7 70 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 VSIG8P0DPA2 414 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 TBC1D28Q2M2D7 210 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 TMEM240Q5SV17 173 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 C1orf140Q5VVS0 124 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 SPSB3Q6PJ21 355 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 OR52N5Q8NH56 324 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 OR5P3Q8WZ94 311 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 ZNF414Q96IQ9 312 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 IL36RNQ9UBH0 155 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 ENTPD2Q9Y5L3 495 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 hADV38S2A0JD32 116 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 SYS1-DBNDD2H3BUS1 97 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 HOXA3O43365 443 aaPredicted RBP7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 OR9G9P0C7N8 305 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 OTOSQ8NHW6 89 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 DDIT4LQ96D03 193 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 OXGR1Q96P68 337 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 GFI1Q99684 422 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 CCL28Q9NRJ3 127 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 RLFQ13129 1914 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 SLC25A5P05141 298 aaKnown RBP7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 RPL27P61353 136 aaKnown RBP7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 CACNG7P62955 275 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 MKXQ8IYA7 352 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 WFDC11Q8NEX6 87 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 TMED7-TICAM2A0A0A6YYA0 188 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 A0A1W2PP55 124 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 NAPSAO96009 420 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 PAQR4Q8N4S7 273 aaPredicted RBP7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 C15orf53Q8NAA6 179 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 C5P01031 1676 aa7.64□□□□□ -1.19
GTF2A1-203ENST00000553612 CRYBB3P26998 211 aa7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 KISS1Q15726 138 aa7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 ZDHHC16Q969W1 377 aa7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 R3HDMLQ9H3Y0 253 aa7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 FAM124BQ9H5Z6 455 aaPredicted RBP7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 RRHO14718 337 aa7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 RS1O15537 224 aa7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 APOHP02749 345 aaPredicted RBP7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 LMO1P25800 156 aa7.63□□□□□ -1.19
GTF2A1-203ENST00000553612 PTCRAQ6ISU1 281 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms