RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TFF3Q07654 80 aa12.27□□□□□ -0.44
DDX55-209ENST00000542286 C1orf194Q5T5A4 169 aa12.27□□□□□ -0.44
DDX55-209ENST00000542286 GCSAMQ8N6F7 178 aa12.27□□□□□ -0.44
DDX55-209ENST00000542286 WFIKKN1Q96NZ8 548 aa12.27□□□□□ -0.44
DDX55-209ENST00000542286 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 J3QW42 95 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 GNB2P62879 340 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 SLC35E4Q6ICL7 350 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 ZADH2Q8N4Q0 377 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 PCGF1Q9BSM1 259 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 SLC25A22Q9H936 323 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 ZNRD1Q9P1U0 126 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 GNG12Q9UBI6 72 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 FUT9Q9Y231 359 aa12.27□□□□□ -0.45
DDX55-209ENST00000542286 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.45
DDX55-209ENST00000542286 KLK10O43240 276 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 KITLGP21583 273 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 CCKARP32238 428 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 SMIM21Q3B7S5 101 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 OR51G1Q8NGK1 321 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 TMEM170AQ8WVE7 144 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 AGMATQ9BSE5 352 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 FKBP11Q9NYL4 201 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 FCGR3BO75015 233 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 EIF4EBP1Q13541 118 aaPredicted RBP12.26□□□□□ -0.45
DDX55-209ENST00000542286 PRSS8Q16651 343 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 ACSM6Q6P461 480 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 ITLN1Q8WWA0 313 aa12.26□□□□□ -0.45
DDX55-209ENST00000542286 POLR3KQ9Y2Y1 108 aaPredicted RBP12.26□□□□□ -0.45
DDX55-209ENST00000542286 TRAV3A0A0B4J244 114 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 C15orf65H3BRN8 121 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 ZNF737O75373 536 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 RPLP1P05386 114 aaKnown RBP12.25□□□□□ -0.45
DDX55-209ENST00000542286 OR9G9P0C7N8 305 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 GALR1P47211 349 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 ZNF705AQ6ZN79 300 aaPredicted RBP12.25□□□□□ -0.45
DDX55-209ENST00000542286 QTRT1Q9BXR0 403 aaKnown RBP12.25□□□□□ -0.45
DDX55-209ENST00000542286 WDR61Q9GZS3 305 aaKnown RBP12.25□□□□□ -0.45
DDX55-209ENST00000542286 A0A1W2PPQ1 181 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 LRRC30A6NM36 301 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 GCSAMLQ5JQS6 135 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 RPP25LQ8N5L8 163 aaKnown RBP12.25□□□□□ -0.45
DDX55-209ENST00000542286 Q8TCH9 128 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 OR5B12Q96R08 314 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 P2RX4Q99571 388 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
DDX55-209ENST00000542286 SLC25A6P12236 298 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 GAGE1Q13065 139 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 TAF15Q92804 592 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX55-209ENST00000542286 ELOVL1Q9BW60 279 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 NAT8Q9UHE5 227 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 AHRRA9YTQ3 701 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 H7BYZ3 331 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 MYOD1P15172 320 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 FAM3BP58499 235 aaPredicted RBP12.24□□□□□ -0.45
DDX55-209ENST00000542286 TCF15Q12870 199 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 H2BFWTQ7Z2G1 175 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 ABCA4P78363 2273 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 KIR2DL5BA0A0G2JN68 375 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 KIR2DL5BA0A0G2JPC4 375 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 M0QZK8 103 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 GGCTO75223 188 aaKnown RBP12.24□□□□□ -0.45
DDX55-209ENST00000542286 BSXQ3C1V8 233 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 KIR2DL5AQ8N109 375 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 HSPB7Q9UBY9 170 aa12.24□□□□□ -0.45
DDX55-209ENST00000542286 M0R1X1 148 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 CRYABP02511 175 aaKnown RBP12.23□□□□□ -0.45
DDX55-209ENST00000542286 P0C879 139 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 HBG1P69891 147 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 HBG2P69892 147 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 RTP5Q14D33 572 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 MBNL2Q5VZF2 373 aaKnown RBP12.23□□□□□ -0.45
DDX55-209ENST00000542286 TMEM14EPQ6UXP3 125 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 GBGT1Q8N5D6 347 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 RBMXL3Q8N7X1 1067 aaKnown RBP12.23□□□□□ -0.45
DDX55-209ENST00000542286 C1orf162Q8NEQ5 155 aaPredicted RBP12.23□□□□□ -0.45
DDX55-209ENST00000542286 MBD3L1Q8WWY6 194 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 MAP1LC3B2A6NCE7 125 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 ZNF891A8MT65 544 aaPredicted RBP12.23□□□□□ -0.45
DDX55-209ENST00000542286 LINC00614P0C842 121 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 GPR12P47775 334 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 MRPS11P82912 194 aaKnown RBP12.23□□□□□ -0.45
DDX55-209ENST00000542286 ACTL10Q5JWF8 245 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 MRGPRGQ86SM5 289 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 ARL6IP6Q8N6S5 226 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 MAP1LC3BQ9GZQ8 125 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 NAGKQ9UJ70 344 aa12.23□□□□□ -0.45
DDX55-209ENST00000542286 MBD3L4A6NDZ8 208 aaPredicted RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 MBD3L3A6NE82 208 aaPredicted RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 MBD3L5A6NJ08 208 aaPredicted RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 IRF2P14316 349 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 CYP2G1PQ6ZSU1 146 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 MBD3L2Q8NHZ7 208 aaPredicted RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 RNF212BA8MTL3 300 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms