RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 GZMBP10144 247 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 PAX1P15863 534 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 JOSD1Q15040 202 aaPredicted RBP12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 LTC4SQ16873 150 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 STUMQ69YW2 141 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 TMEM183AQ8IXX5 376 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 OR10A7Q8NGE5 316 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 RNASE11Q8TAA1 199 aaKnown RBP12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 FAM222BQ8WU58 562 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 GALMQ96C23 342 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 GPR146Q96CH1 333 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 MS4A5Q9H3V2 200 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 RBM7Q9Y580 266 aaKnown RBP12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 YLPM1P49750 1951 aaKnown RBP12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 IGHV3-43A0A0B4J1X8 118 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 LRRC30A6NM36 301 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 CEBPZOSA8MTT3 80 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 IGHV3-43DP0DP04 118 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 WDR25Q64LD2 544 aaPredicted RBP12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 FAM216BQ8N7L0 139 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 OR52L2PQ8NGH6 319 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 SCGB1C1Q8TD33 95 aa12.64□□□□□ -0.39
CLPTM1-202ENST00000541297 AMBPP02760 352 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 EFNB3Q15768 340 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 FGFRL1Q8N441 504 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 KIAA1324LA8MWY0 1029 aaPredicted RBP12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 H0Y980 276 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 DVL1O14640 695 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 MGST3O14880 152 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 ARL16Q0P5N6 197 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 ZNF664Q8N3J9 261 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 NECAP1Q8NC96 275 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 OR10V1Q8NGI7 309 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 MBD3L1Q8WWY6 194 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 GAB2Q9UQC2 676 aa12.63□□□□□ -0.39
CLPTM1-202ENST00000541297 ODAMA1E959 279 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 A8MWP6 167 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 TMPRSS2O15393 492 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 SNRPCP09234 159 aaKnown RBP12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 METTL15P1P0C7V9 234 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 RELQ04864 619 aaPredicted RBP12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 ADIRFQ15847 76 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 SSX2Q16385 188 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 Q6ZRM9 215 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 OR51H1Q8NH63 302 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 PPP1R35Q8TAP8 253 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 IAPPP10997 89 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 FGF7P21781 194 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 F2RP25116 425 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 C2orf88Q9BSF0 95 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 RBKSQ9H477 322 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 SRD5A3Q9H8P0 318 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 TMEM106BQ9NUM4 274 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 VAX2Q9UIW0 290 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 KCNS2Q9ULS6 477 aa12.62□□□□□ -0.39
CLPTM1-202ENST00000541297 NPIPB11E5RHQ5 1161 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 C19orf84I3L1E1 186 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 OR1P1Q8NH06 330 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 IL22RA2Q969J5 263 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 BBC3Q96PG8 261 aaPredicted RBP12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 P2RX4Q99571 388 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 CTDSP1Q9GZU7 261 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 SPTAN1Q13813 2472 aaKnown RBP12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 TACC2O95359 2948 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 LYNX1G3V0Z9 82 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 TMEM178BH3BS89 294 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 LYNX1P0DP58 116 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 USF2Q15853 346 aaPredicted RBP12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 TEX36Q5VZQ5 186 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 SDSLQ96GA7 329 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 RAB40CQ96S21 281 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 TMEM204Q9BSN7 226 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 RNF150Q9ULK6 438 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 ZNF705GA8MUZ8 300 aaPredicted RBP12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 IGLV2-14P01704 120 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 PFN1P07737 140 aaKnown RBP12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 CLEC12BQ2HXU8 276 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 ZNF788Q6ZQV5 615 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 ZNF808Q8N4W9 903 aaPredicted RBP12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 ZNF525Q8N782 197 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 RNASEH2CQ8TDP1 164 aaKnown RBP12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 NINJ1Q92982 152 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 LURAP1Q96LR2 239 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 LAMP3Q9UQV4 416 aa12.61□□□□□ -0.39
CLPTM1-202ENST00000541297 UTP20O75691 2785 aaKnown RBP12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 PPIAL4EA0A075B759 164 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 XKRY2A2RUG3 117 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 PPIAL4DF5H284 164 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 IGHV3-7P01780 117 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 SERPINE2P07093 398 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 PPIAL4FP0DN26 164 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 GZMHP20718 246 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 ELLP55199 621 aaPredicted RBP12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 HAPLN4Q86UW8 402 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 TGIF2LXQ8IUE1 241 aa12.6□□□□□ -0.39
CLPTM1-202ENST00000541297 SMIM7Q9BQ49 75 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms