RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 TCTE3Q8IZS6 198 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 OR1L6Q8NGR2 347 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 OR52I2Q8NH67 350 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 TMEM68Q96MH6 324 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 PAIP2BQ9ULR5 123 aaKnown RBP6.77□□□□□ -1.33
USP28-205ENST00000537706 A0A0A6YYH2 397 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 IGHV3-43A0A0B4J1X8 118 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 TMEM272A0A1B0GTI8 110 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 ANKRD20A5PA0PJZ0 165 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 A6NJ64 397 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 C2orf70A6NJV1 201 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 DHFRP00374 187 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 MT-ND4P03905 459 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 TCRBP04435 133 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 IGHV3-43DP0DP04 118 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 EGR2P11161 476 aaPredicted RBP6.76□□□□□ -1.33
USP28-205ENST00000537706 CCL1P22362 96 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 PAX5Q02548 391 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 SSBP1Q04837 148 aaKnown RBP6.76□□□□□ -1.33
USP28-205ENST00000537706 C1orf100Q5SVJ3 147 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 SERTAD4-AS1Q5TG53 156 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 ZNF529Q6P280 563 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 ZNF562Q6V9R5 426 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 RBPMS2Q6ZRY4 209 aaKnown RBP6.76□□□□□ -1.33
USP28-205ENST00000537706 SERPINA12Q8IW75 414 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 SAXO1Q8IYX7 474 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 OR4A5Q8NH83 315 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 PTX4Q96A99 478 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 HRH4Q9H3N8 390 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 DIABLOQ9NR28 239 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 SPINT2O43291 252 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 TUSC2O75896 110 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 HTR3BO95264 441 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 BDKRB2P30411 391 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 PLA2G7Q13093 441 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 OR2C3Q8N628 320 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 OR5T1Q8NG75 326 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 OR51A2Q8NGJ7 313 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 FRZBQ92765 325 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 SPSB1Q96BD6 273 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 GALNT14Q96FL9 552 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 CCDC140Q96MF4 163 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 CLCC1Q96S66 551 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 UQCC2Q9BRT2 126 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 HRASLSQ9HDD0 168 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 TMEM138Q9NPI0 162 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 TAS2R8Q9NYW2 309 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
USP28-205ENST00000537706 IGLV2-18A0A075B6J9 118 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 TRAV6A0A075B6T7 132 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 TRAV25A0A0B4J276 109 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 TMEM30CPA0ZSE6 113 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 SCAF4O95104 1147 aaKnown RBP6.75□□□□□ -1.33
USP28-205ENST00000537706 GSTP1P09211 210 aaKnown RBP6.75□□□□□ -1.33
USP28-205ENST00000537706 ZNF20P17024 532 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 RPL35AP18077 110 aaKnown RBP6.75□□□□□ -1.33
USP28-205ENST00000537706 RAB6AP20340 208 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 FAUP35544 74 aaKnown RBP6.75□□□□□ -1.33
USP28-205ENST00000537706 CCR6P51684 374 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 C2orf76Q3KRA6 126 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 Q6ZR54 194 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 TMEM61Q8N0U2 210 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 JAGN1Q8N5M9 183 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 OR11H2Q8NH07 326 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 GRPEL2Q8TAA5 225 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 ADAT3Q96EY9 351 aaPredicted RBP6.75□□□□□ -1.33
USP28-205ENST00000537706 ZNF486Q96H40 463 aaPredicted RBP6.75□□□□□ -1.33
USP28-205ENST00000537706 RITA1Q96K30 269 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 NDUFAF3Q9BU61 184 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 C20orf85Q9H1P6 137 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 KCNK15Q9H427 330 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 MCUBQ9NWR8 336 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 MTFP1Q9UDX5 166 aa6.75□□□□□ -1.33
USP28-205ENST00000537706 TRAV39A0A0B4J263 110 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 MPTX1A8MV57 137 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 SULT1C2O00338 296 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 SLC31A2O15432 143 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 RBBP9O75884 186 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 BPNT1O95861 308 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 TRBV12-3P01733 135 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 AMBPP02760 352 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 H2AFB2P0C5Z0 115 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 RAB3AP20336 220 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 NKX2-5P52952 324 aaPredicted RBP6.74□□□□□ -1.33
USP28-205ENST00000537706 LINC00205P59089 165 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 OR5D14Q8NGL3 314 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 FGGYQ96C11 551 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 FYTTD1Q96QD9 318 aaKnown RBP6.74□□□□□ -1.33
USP28-205ENST00000537706 MRPL20Q9BYC9 149 aaKnown RBP6.74□□□□□ -1.33
USP28-205ENST00000537706 SCPEP1Q9HB40 452 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 KLK11Q9UBX7 282 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 PRAF2O60831 178 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 SCGNO76038 276 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 CA2P00918 260 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 C1QBP02746 253 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 FCGR2BP31994 310 aaPredicted RBP6.74□□□□□ -1.33
USP28-205ENST00000537706 ADMP35318 185 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 IL13RA2Q14627 380 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 FXYD3Q14802 87 aa6.74□□□□□ -1.33
USP28-205ENST00000537706 RAB12Q6IQ22 244 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms