RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 TRBV4-1A0A0J9YWV2 114 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 SMIM9A6NGZ8 99 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 FAM90A7PA6NKC0 464 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 DHRS7CA6NNS2 312 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 RIIAD1A6NNX1 92 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 RAB29O14966 203 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 SIVA1O15304 175 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 ZSCAN12O43309 604 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 IGKV1D-12P01611 117 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 IGLV3-1P01715 115 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 APOA2P02652 100 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 TTRP02766 147 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 DEFA4P12838 97 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 ALDH3B2P48448 385 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 RIDAP52758 137 aaKnown RBP2.6□□□□□ -1.99
YBX3-205ENST00000536107 UBE2KP61086 200 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 SELENOWP63302 87 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 LIPEQ05469 1076 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 STX3Q13277 289 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 OR5I1Q13606 314 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 ALKBH1Q13686 389 aaKnown RBP2.6□□□□□ -1.99
YBX3-205ENST00000536107 GNMTQ14749 295 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 C6orf183Q5T699 404 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 UBE2UQ5VVX9 321 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 CFAP161Q6P656 301 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 DLEU7Q6UYE1 221 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 C19orf35Q6ZS72 473 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 TRMT10CQ7L0Y3 403 aaKnown RBP2.6□□□□□ -1.99
YBX3-205ENST00000536107 TCF24Q7RTU0 167 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 VTCN1Q7Z7D3 282 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 ELMOD2Q8IZ81 293 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 CMTM1Q8IZ96 169 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 ARHGAP24Q8N264 748 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 DRAXINQ8NBI3 349 aaPredicted RBP2.6□□□□□ -1.99
YBX3-205ENST00000536107 SUMF2Q8NBJ7 301 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 HSD17B11Q8NBQ5 300 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 SRSF12Q8WXF0 261 aaKnown RBP2.6□□□□□ -1.99
YBX3-205ENST00000536107 TMEM190Q8WZ59 177 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 FCGR1BQ92637 280 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 GNPNAT1Q96EK6 184 aaPredicted RBP2.6□□□□□ -1.99
YBX3-205ENST00000536107 ZNF414Q96IQ9 312 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 CGREF1Q99674 301 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 SPIN2AQ99865 258 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 SPIN2BQ9BPZ2 258 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 UPK3BQ9BT76 320 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 CHAC1Q9BUX1 264 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 RHPN1-AS1Q9BWJ2 59 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 TTTY10Q9BZA0 68 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 C20orf27Q9GZN8 174 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 MED20Q9H944 212 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 PIPOXQ9P0Z9 390 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 OR52A1Q9UKL2 312 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 AP3M1Q9Y2T2 418 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 MRPS16Q9Y3D3 137 aaKnown RBP2.6□□□□□ -1.99
YBX3-205ENST00000536107 ETV7Q9Y603 341 aa2.6□□□□□ -1.99
YBX3-205ENST00000536107 TRBV7-1A0A0A6YYK4 115 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 A0A1B0GTI1 187 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 A0A1W2PRQ8 180 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 ANGPT2O15123 496 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 GMNNO75496 209 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 SULT1C4O75897 302 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 OR7C1O76099 320 aaPredicted RBP2.59□□□□□ -1.99
YBX3-205ENST00000536107 YIF1AO95070 293 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 DHFRP00374 187 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 HBE1P02100 147 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 MT-ND4P03905 459 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 IGKV1-16P04430 117 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 EIF4EP06730 217 aaKnown RBP2.59□□□□□ -1.99
YBX3-205ENST00000536107 ATF1P18846 271 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 PSMB6P28072 239 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 TNFSF8P32971 234 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 KDELR2P33947 212 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 IFNGR2P38484 337 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 HCCSP53701 268 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 SF3A3Q12874 501 aaKnown RBP eCLIP2.59□□□□□ -1.99
YBX3-205ENST00000536107 CBX3Q13185 183 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 DGCR6Q14129 220 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 ZSCAN26Q16670 478 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 IFI44LQ53G44 452 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 AGKQ53H12 422 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 SAMD4BQ5PRF9 694 aaKnown RBP2.59□□□□□ -1.99
YBX3-205ENST00000536107 SYT6Q5T7P8 510 aaPredicted RBP2.59□□□□□ -1.99
YBX3-205ENST00000536107 LINC01590Q5TEZ4 76 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 OR10K2Q6IF99 312 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 Q6ZSA8 131 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 TTC9CQ8N5M4 171 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 Q8N814 137 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 EIF1ADQ8N9N8 165 aaKnown RBP2.59□□□□□ -1.99
YBX3-205ENST00000536107 TMEM116Q8NCL8 245 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 OR4B1Q8NGF8 309 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 OR4K15Q8NH41 348 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 CIRBP-AS1Q8TBR5 109 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 PPP1R14BQ96C90 147 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 CXorf58Q96LI9 332 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 OPALINQ96PE5 141 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 RAB40CQ96S21 281 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 C7orf50Q9BRJ6 194 aaKnown RBP2.59□□□□□ -1.99
YBX3-205ENST00000536107 MS4A6AQ9H2W1 248 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 MOB1AQ9H8S9 216 aa2.59□□□□□ -1.99
YBX3-205ENST00000536107 RHOFQ9HBH0 211 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms