RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	CCR7	P32248	378 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	HSPA9	P38646	679 aa	Known RBP	0.99	□□□□□ -2.25
RDX-215	ENST00000533961	MAGEA12	P43365	314 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	OR1E2	P47887	323 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	MARCKSL1	P49006	195 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	GNG10	P50151	68 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	SNAP25	P60880	206 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	HIST1H3A	P68431	136 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	H3F3A	P84243	136 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	PPP1R1A	Q13522	171 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	KRR1	Q13601	381 aa	Known RBP	0.99	□□□□□ -2.25
RDX-215	ENST00000533961	POU6F1	Q14863	301 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	BATF	Q16520	125 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	0.99	□□□□□ -2.25
RDX-215	ENST00000533961	C1orf195	Q5TG92	126 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	DHRS4L2	Q6PKH6	230 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	HIST2H3A	Q71DI3	136 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	ZNF550	Q7Z398	422 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	TMED4	Q7Z7H5	227 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	LYG2	Q86SG7	212 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	BAP18	Q8IXM2	172 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	C1orf174	Q8IYL3	243 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	TMEM86B	Q8N661	226 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	NATD1	Q8N6N6	113 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	CLDN22	Q8N7P3	220 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	ZNF676	Q8N7Q3	588 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	0.99	□□□□□ -2.25
RDX-215	ENST00000533961	SLC35G5	Q96KT7	338 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	OR7D2	Q96RA2	312 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	NIPSNAP1	Q9BPW8	284 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	TMEM109	Q9BVC6	243 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	EIF5A2	Q9GZV4	153 aa	Known RBP	0.99	□□□□□ -2.25
RDX-215	ENST00000533961	OR51I1	Q9H343	314 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	GLTP	Q9NZD2	209 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	SMPX	Q9UHP9	88 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	DKKL1	Q9UK85	242 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	SNX12	Q9UMY4	172 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	FIS1	Q9Y3D6	152 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	ALG5	Q9Y673	324 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961		V9GYQ6	96 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	THSD7A	Q9UPZ6	1657 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	MPDZ	O75970	2070 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	AHNAK2	Q8IVF2	5795 aa		0.99	□□□□□ -2.25
RDX-215	ENST00000533961	DOCK10	Q96BY6	2186 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	PIK3C2G	O75747	1445 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	ANKRD30A	Q9BXX3	1397 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	PBRM1	Q86U86	1689 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	C5orf49	A4QMS7	147 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	ARRDC5	A6NEK1	342 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961		M0R381	172 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	PGRMC1	O00264	195 aa	Known RBP	0.98	□□□□□ -2.25
RDX-215	ENST00000533961	UBE2L6	O14933	153 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	GNRH2	O43555	120 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	CHP2	O43745	196 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	NOS1AP	O75052	506 aa	Predicted RBP	0.98	□□□□□ -2.25
RDX-215	ENST00000533961	TNNC2	P02585	160 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	CCL3	P10147	92 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	CRHBP	P24387	322 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	TCL1A	P56279	114 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	KRTAP10-4	P60372	401 aa	Predicted RBP	0.98	□□□□□ -2.25
RDX-215	ENST00000533961	SPCS3	P61009	180 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	SARNP	P82979	210 aa	Known RBP	0.98	□□□□□ -2.25
RDX-215	ENST00000533961	FABP5	Q01469	135 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	JOSD1	Q15040	202 aa	Predicted RBP	0.98	□□□□□ -2.25
RDX-215	ENST00000533961	ACOT6	Q3I5F7	207 aa	Predicted RBP	0.98	□□□□□ -2.25
RDX-215	ENST00000533961	FAM78B	Q5VT40	261 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	LCN8	Q6JVE9	175 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	RASSF6	Q6ZTQ3	369 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	AKAP14	Q86UN6	197 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	SLC51B	Q86UW2	128 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	NAA40	Q86UY6	237 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	COMMD7	Q86VX2	200 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	LRRC28	Q86X40	367 aa	Predicted RBP	0.98	□□□□□ -2.25
RDX-215	ENST00000533961	OR6V1	Q8N148	313 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	DAND5	Q8N907	189 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	OR51D1	Q8NGF3	324 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	OR2D3	Q8NGH3	330 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	OR1L8	Q8NGR8	309 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	OR10X1	Q8NGY0	326 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	RPS4Y2	Q8TD47	263 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961		Q8WTZ3	238 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	SLC35B4	Q969S0	331 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	MRPL32	Q9BYC8	188 aa	Known RBP	0.98	□□□□□ -2.25
RDX-215	ENST00000533961	BOLA2	Q9H3K6	86 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	PSORS1C2	Q9UIG4	136 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	ANGPT4	Q9Y264	503 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	ATAD5	Q96QE3	1844 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	CCDC144A	A2RUR9	1427 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	DCC	P43146	1447 aa		0.98	□□□□□ -2.25
RDX-215	ENST00000533961	NCKAP5	O14513	1909 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	KIF15	Q9NS87	1388 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	DICER1	Q9UPY3	1922 aa	Known RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	ZCCHC11	Q5TAX3	1644 aa	Known RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	PLXNA3	P51805	1871 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961		A0A087WUJ7	227 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	TMED7-TICAM2	A0A0A6YYA0	188 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	TRAV8-1	A0A0A6YYK1	113 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961		A8MUN3	132 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	GSTZ1	O43708	216 aa	Predicted RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	KLRC4	O43908	158 aa		0.97	□□□□□ -2.25

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms