RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 TEX22C9J3V5 150 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 ACTL6BO94805 426 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 HRASP01112 189 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 IL6RP08887 468 aaPredicted RBP8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 DEFA5Q01523 94 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 POU2AF1Q16633 256 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 SSX9Q7RTT3 188 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 TTC9CQ8N5M4 171 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 OR6F1Q8NGZ6 308 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 OR51H1Q8NH63 302 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 SPIN2AQ99865 258 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 SPIN2BQ9BPZ2 258 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 FXYD6Q9H0Q3 95 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 BET1LQ9NYM9 111 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 MPPED1O15442 326 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 PGLYRP1O75594 196 aaPredicted RBP8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 HPRT1P00492 218 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 RCVRNP35243 200 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 MAS1LP35410 378 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 INSL3P51460 131 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 TAS2R31P59538 309 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF45Q02386 682 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 AADACL3Q5VUY0 350 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 OR4A47Q6IF82 309 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF343Q6P1L6 599 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 CLVS1Q8IUQ0 354 aaPredicted RBP8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 BORCS5Q969J3 196 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 USMG5Q96IX5 58 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 MIXL1Q9H2W2 232 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 DNAH9Q9NYC9 4486 aa8.93□□□□□ -0.98
SH3RF1-205ENST00000511421 TRBV9A0A0B4J1U6 114 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 HMX3A6NHT5 357 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 TPPPO94811 219 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 PRH1P02810 166 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF735P0CB33 412 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 MYOD1P15172 320 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 ECI1P42126 302 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 RPL27AP46776 148 aaKnown RBP8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 DEFB121Q5J5C9 76 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 ACSM6Q6P461 480 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 OR4A5Q8NH83 315 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 CD300LFQ8TDQ1 290 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 ABHD1Q96SE0 405 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 AIFM2Q9BRQ8 373 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 PLEKHA2Q9HB19 425 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 RANGRFQ9HD47 186 aaPredicted RBP8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 EXTL2Q9UBQ6 330 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 SORL1Q92673 2214 aa8.92□□□□□ -0.98
SH3RF1-205ENST00000511421 TRAV3A0A0B4J244 114 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 ANKRD34BA5PLL1 514 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 CGB1A6NKQ9 187 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 GPR31O00270 319 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 S1PR2O95136 353 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 TRBV12-3P01733 135 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 NQO2P16083 231 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 F2RP25116 425 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 TMBIM6P55061 237 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 RPL8P62917 257 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 RHOGP84095 191 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 VAX1Q5SQQ9 334 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF429Q86V71 674 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 OR52I2Q8NH67 350 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 RAB2BQ8WUD1 216 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 AKIP1Q9NQ31 210 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 SLC2A9Q9NRM0 540 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 COMMD9Q9P000 198 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 KLK11Q9UBX7 282 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 FAM223BA6NKX1 122 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 NPIPB5A8MRT5 1133 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 UPK2O00526 184 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 CTDSP2O14595 271 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 RLN1P04808 185 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 HLA-GP17693 338 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 ZP3P21754 424 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 RPL5P46777 297 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 TSPAN5P62079 268 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 KLF5Q13887 457 aaPredicted RBP8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF585BQ52M93 769 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 RNASE12Q5GAN4 147 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 C19orf35Q6ZS72 473 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 SLC25A42Q86VD7 318 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 FAM223AQ8IWN6 122 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 CMTM1Q8IZ96 169 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 DYNC2LI1Q8TCX1 351 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 DGCR14Q96DF8 476 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 FYTTD1Q96QD9 318 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 PRR25Q96S07 402 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 BCL7BQ9BQE9 202 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 RSRP1Q9BUV0 290 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 HRASLSQ9HDD0 168 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 PEF1Q9UBV8 284 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 MTFP1Q9UDX5 166 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF257Q9Y2Q1 563 aa8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 LSM4Q9Y4Z0 139 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-205ENST00000511421 M0QYG6 137 aa8.9□□□□□ -0.98
SH3RF1-205ENST00000511421 SAP30O75446 220 aa8.9□□□□□ -0.98
SH3RF1-205ENST00000511421 CRYGCP07315 174 aa8.9□□□□□ -0.98
SH3RF1-205ENST00000511421 AREGP15514 252 aa8.9□□□□□ -0.98
SH3RF1-205ENST00000511421 UCP3P55916 312 aa8.9□□□□□ -0.98
SH3RF1-205ENST00000511421 OR2B8PP59922 312 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms