RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 EFEMP2O95967 443 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 ECI1P42126 302 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 GPM6AP51674 278 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 CLDN18P56856 261 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 HIST3H3Q16695 136 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 DCAF12Q5T6F0 453 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 WDR73Q6P4I2 378 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 LCNL1Q6ZST4 164 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 VKORC1L1Q8N0U8 176 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF611Q8N823 705 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 OR13H1Q8NG92 308 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 MRPS16Q9Y3D3 137 aaKnown RBP6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 F11RQ9Y624 299 aaKnown RBP6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 INTS1Q8N201 2190 aaKnown RBP6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 PPIAL4EA0A075B759 164 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 FAM181BA6NEQ2 426 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 DEFB108AA8MXU0 73 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 TOX4O94842 621 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 CER1O95813 267 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 PPIAL4FP0DN26 164 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 B4GALT1P15291 398 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 COX5AP20674 150 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 RPEL1Q2QD12 228 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 MORN2Q502X0 79 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 TMEM177Q53S58 311 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 LRRC10Q5BKY1 277 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 FGFRL1Q8N441 504 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 PNKDQ8N490 385 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 AP1S3Q96PC3 154 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 NPCDR1Q9BY65 106 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 CDC42EP3Q9UKI2 254 aa6.09□□□□□ -1.43
LIMCH1-207ENST00000508466 A0A0J9YY10 115 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 G3V4G9 280 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 AGFG2O95081 481 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 EPHA8P29322 1005 aaPredicted RBP6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 LGALS4P56470 323 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 SERF2P84101 59 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 OR10W1Q8NGF6 305 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 BMFQ96LC9 184 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 RAB40CQ96S21 281 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 ASCL2Q99929 193 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 NUDT16L1Q9BRJ7 211 aaKnown RBP6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 IL36BQ9NZH7 164 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 ZGRF1Q86YA3 2104 aa6.09□□□□□ -1.44
LIMCH1-207ENST00000508466 CUBNO60494 3623 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 LIPT2A6NK58 231 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 FAM166BA8MTA8 275 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 CGAP01215 116 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 APCSP02743 223 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 IGLC1P0CG04 106 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 ESDP10768 282 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 PPIFP30405 207 aaKnown RBP6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 MFAP2P55001 183 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 RPS21P63220 83 aaKnown RBP6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 RHOGP84095 191 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 RBPJQ06330 500 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 DAZAP2Q15038 168 aaPredicted RBP6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 WFDC3Q8IUB2 231 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 FGFBP3Q8TAT2 258 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 PRDM6Q9NQX0 595 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 ZNF355PQ9NSJ1 428 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 COPS7AQ9UBW8 275 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 FZR1Q9UM11 496 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 TSSC4Q9Y5U2 329 aaPredicted RBP6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 C2orf16Q68DN1 1984 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 IGHV5-51A0A0C4DH38 117 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 TNFSF14O43557 240 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 UBE2G1P62253 170 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 NRN1LQ496H8 165 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 GDF5OSQ5U4N7 250 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 LILRA6Q6PI73 481 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM136Q6ZRR5 245 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 SH2D6Q7Z4S9 175 aa6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 MRPL13Q9BYD1 178 aaKnown RBP6.08□□□□□ -1.44
LIMCH1-207ENST00000508466 SYNGR1O43759 233 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 CKS1BP61024 79 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 SCGB2A2Q13296 93 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 GAB4Q2WGN9 574 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 ZNF585BQ52M93 769 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 CNKSR3Q6P9H4 555 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 SFTA2Q6UW10 78 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 Q6ZSR6 202 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 DEFB125Q8N687 156 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 OR2Z1Q8NG97 314 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 OR5A2Q8NGI9 324 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 RFESDQ8TAC1 157 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 C18orf32Q8TCD1 76 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 NEU4Q8WWR8 484 aaPredicted RBP6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 REPIN1Q9BWE0 567 aaKnown RBP6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 HINT2Q9BX68 163 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 TTTY13Q9BZ97 58 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 IL36GQ9NZH8 169 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 B4GALT7Q9UBV7 327 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 IGHV3-43A0A0B4J1X8 118 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 IGHV3-43DP0DP04 118 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 INSL3P51460 131 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 NOGQ13253 232 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 SLC25A34Q6PIV7 304 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms