RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 RAB3CQ96E17 227 aa13.1□□□□□ -0.31
NUP50-218ENST00000493456 KCNK7Q9Y2U2 307 aa13.1□□□□□ -0.31
NUP50-218ENST00000493456 DENRO43583 198 aaKnown RBP13.09□□□□□ -0.31
NUP50-218ENST00000493456 KBTBD11O94819 623 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 IL6RP08887 468 aaPredicted RBP13.09□□□□□ -0.31
NUP50-218ENST00000493456 ZNF735P0CB33 412 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 PSMB6P28072 239 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 SSX1Q16384 188 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 ZNF585BQ52M93 769 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 LAIR2Q6ISS4 152 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 UNQ9165/PRO28630Q6UXU0 137 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 H1FOOQ8IZA3 346 aaPredicted RBP13.09□□□□□ -0.31
NUP50-218ENST00000493456 C8orf59Q8N0T1 100 aaPredicted RBP13.09□□□□□ -0.31
NUP50-218ENST00000493456 ZNF645Q8N7E2 425 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 FAM3DQ96BQ1 224 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 CXorf58Q96LI9 332 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 OR2A7Q96R45 310 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 C5orf66Q9H5L9 145 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 C8orf4Q9NR00 106 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 FKBP14Q9NWM8 211 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 UFC1Q9Y3C8 167 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 S4R3C0 116 aa13.09□□□□□ -0.31
NUP50-218ENST00000493456 DNAH2Q9P225 4427 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 MYOD1P15172 320 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 CD36P16671 472 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 CTRB1P17538 263 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 MED22Q15528 200 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 C2orf76Q3KRA6 126 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 CTRB2Q6GPI1 263 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 Q6ZS49 121 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 PACRGLQ8N7B6 248 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 BPIFB6Q8NFQ5 453 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 OR4S2Q8NH73 311 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 FBLIM1Q8WUP2 373 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 MAFIPQ8WZ33 124 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 UBQLN2Q9UHD9 624 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 RAB22AQ9UL26 194 aa13.08□□□□□ -0.32
NUP50-218ENST00000493456 AK6Q9Y3D8 172 aaKnown RBP13.08□□□□□ -0.32
NUP50-218ENST00000493456 E7EUB6 86 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 TSPAN4O14817 238 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 ARL6IP5O75915 188 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 SLC22A5O76082 557 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 CLEC3BP05452 202 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 AREGP15514 252 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 GADD45AP24522 165 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 CLDN12P56749 244 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 SPHARQ15513 63 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 VKORC1L1Q8N0U8 176 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 TMEM167AQ8TBQ9 72 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 MFFQ9GZY8 342 aa13.07□□□□□ -0.32
NUP50-218ENST00000493456 IGLV11-55A0A075B6I3 123 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 TMEM272A0A1B0GTI8 110 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 A0A1B0GW64 132 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 MFSD2BA6NFX1 497 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 MFNGO00587 321 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 DEFA4P12838 97 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 LAMTOR1Q6IAA8 161 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 PUSL1Q8N0Z8 303 aaKnown RBP13.06□□□□□ -0.32
NUP50-218ENST00000493456 UFD1Q92890 307 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 GALNT14Q96FL9 552 aa13.06□□□□□ -0.32
NUP50-218ENST00000493456 LSM2Q9Y333 95 aaKnown RBP13.06□□□□□ -0.32
NUP50-218ENST00000493456 RBMX2Q9Y388 322 aaKnown RBP13.06□□□□□ -0.32
NUP50-218ENST00000493456 GNAO1P09471 354 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 GNB3P16520 340 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 GPR183P32249 361 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 PSMD7P51665 324 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 TCTAP57738 103 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 ODF3L2Q3SX64 289 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 OR2B11Q5JQS5 317 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 LIPKQ5VXJ0 399 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 TMEM91Q6ZNR0 172 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 OR10R2Q8NGX6 335 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 TMEM203Q969S6 136 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 ZNF436Q9C0F3 470 aaPredicted RBP13.05□□□□□ -0.32
NUP50-218ENST00000493456 MAP6D1Q9H9H5 199 aa13.05□□□□□ -0.32
NUP50-218ENST00000493456 IFNA4P05014 189 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 HIST1H1DP16402 221 aaKnown RBP13.04□□□□□ -0.32
NUP50-218ENST00000493456 PSMA1P25786 263 aaKnown RBP13.04□□□□□ -0.32
NUP50-218ENST00000493456 TALDO1P37837 337 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 RPL30P62888 115 aaKnown RBP13.04□□□□□ -0.32
NUP50-218ENST00000493456 PLA2G7Q13093 441 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 TRAM1Q15629 374 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 PLET1Q6UQ28 207 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 ZNF502Q8TBZ5 544 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 TMEM190Q8WZ59 177 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 HSD17B10Q99714 261 aaKnown RBP13.04□□□□□ -0.32
NUP50-218ENST00000493456 C6orf62Q9GZU0 229 aaPredicted RBP13.04□□□□□ -0.32
NUP50-218ENST00000493456 C11orf68Q9H3H3 251 aaKnown RBP13.04□□□□□ -0.32
NUP50-218ENST00000493456 OR2W1Q9Y3N9 320 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 V9GY05 133 aa13.04□□□□□ -0.32
NUP50-218ENST00000493456 DNAH17Q9UFH2 4485 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 OR4C46A6NHA9 309 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 HLA-DQB1P01920 261 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 RPL35AP18077 110 aaKnown RBP13.03□□□□□ -0.32
NUP50-218ENST00000493456 RPL8P62917 257 aaKnown RBP13.03□□□□□ -0.32
NUP50-218ENST00000493456 PRR20EP86478 221 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 PRR20CP86479 221 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 PRR20DP86480 221 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 PRR20BP86481 221 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms