RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 GMNCA6NCL1 334 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 C10orf142B7Z368 130 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 FAAHO00519 579 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 BHLHE40O14503 412 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 COX7A2P2O60397 106 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 NOS1APO75052 506 aaPredicted RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 SS18L1O75177 396 aaPredicted RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MMP23AO75900 390 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 HLA-DPB1P04440 258 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 HMGN1P05114 100 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF688P0C7X2 276 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM228BP0C875 321 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 TLX1NBP0CAT3 122 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 OR13C7P0DN81 318 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 PSG2P11465 335 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ADRB3P13945 408 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ZBTB25P24278 435 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 OR1E2P47887 323 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MEOX2P50222 304 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 P2RY4P51582 365 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MP68P56378 58 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 HERVK_113P61574 105 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 RPS24P62847 133 aaKnown RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 HLA-DRB3P79483 266 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 C16orf72Q14CZ0 275 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 SSX1Q16384 188 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 Q1RN00 199 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM201AQ5SY85 155 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 OTPQ5XKR4 325 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 SUMF2Q8NBJ7 301 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 OR2M3Q8NG83 312 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 KCTD4Q8WVF5 259 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 SFRP2Q96HF1 295 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 OR2M2Q96R28 347 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 PEBP4Q96S96 227 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 HSD17B10Q99714 261 aaKnown RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 CMSS1Q9BQ75 279 aaKnown RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 HDHD3Q9BSH5 251 aaPredicted RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 DDA1Q9BW61 102 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 C8orf17Q9NRJ1 99 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 UQCC1Q9NVA1 299 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MED29Q9NX70 200 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 HELZP42694 1942 aaKnown RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 CELSR3Q9NYQ7 3312 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MYO16Q9Y6X6 1858 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 NUMA1Q14980 2115 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 DMXL2Q8TDJ6 3036 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 NUP205Q92621 2012 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 EML5Q05BV3 1969 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MIA3Q5JRA6 1907 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 TRAV19A0A0A6YYK7 116 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF729A6NN14 1252 aaPredicted RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 A8MU10 97 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 LGALS9O00182 355 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 GPR31O00270 319 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MRASO14807 208 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 TCF21O43680 179 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 PIAS1O75925 651 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 OR7C1O76099 320 aaPredicted RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 IFNA1P01562 189 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 IGHMP01871 453 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 TTRP02766 147 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 CTLA4P16410 223 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MYL12AP19105 171 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 GADD45AP24522 165 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 IMPA1P29218 277 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 NMUP48645 174 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 RIPPLY3P57055 190 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ELF3P78545 371 aaPredicted RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 POU6F1Q14863 301 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ABCA11PQ4W5N1 156 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 HENMT1Q5T8I9 393 aaKnown RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 LPCAT3Q6P1A2 487 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 DEFB125Q8N687 156 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF525Q8N782 197 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 LINC01555Q8NAE3 123 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF555Q8NEP9 628 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 OR4K5Q8NGD3 323 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 GRPEL2Q8TAA5 225 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM57AQ8TBR7 257 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ABHD3Q8WU67 409 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 TWIST2Q8WVJ9 160 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MAL2Q969L2 176 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 SLC25A44Q96H78 314 aaPredicted RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ACY3Q96HD9 319 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 C1orf147Q96MC9 270 aaPredicted RBP2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 OLFM3Q96PB7 478 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ANAPC13Q9BS18 74 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 MARVELD1Q9BSK0 173 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ERGIC3Q9Y282 383 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 WSB1Q9Y6I7 421 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF780BQ9Y6R6 833 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 CEP295Q9C0D2 2601 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 DOCK9Q9BZ29 2069 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 KIAA1549LQ6ZVL6 1849 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 NCOR2Q9Y618 2525 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 CHD5Q8TDI0 1954 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 IGHV3-72A0A0B4J1Y9 119 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 A0A0D9SEW6 157 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 TEX50A0A1B0GTY4 177 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms