RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 TMED4Q7Z7H5 227 aa15.28■□□□□ 0.04
PCOLCE-208ENST00000487172 SLC25A42Q86VD7 318 aa15.28■□□□□ 0.04
PCOLCE-208ENST00000487172 DMBX1Q8NFW5 382 aa15.28■□□□□ 0.04
PCOLCE-208ENST00000487172 WIPF2Q8TF74 440 aaPredicted RBP15.28■□□□□ 0.04
PCOLCE-208ENST00000487172 SEC22AQ96IW7 307 aa15.28■□□□□ 0.04
PCOLCE-208ENST00000487172 FBN1P35555 2871 aaKnown RBP15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 ATG12O94817 140 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 KRASP01116 189 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 TCRBP04435 133 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 MAS1LP35410 378 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 CRIP2P52943 208 aaPredicted RBP15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 SSBP2P81877 361 aaPredicted RBP15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 C12orf54Q6X4T0 127 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 STPG2Q8N412 459 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 CHPT1Q8WUD6 406 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 TMEM56Q96MV1 263 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 GON7Q9BXV9 100 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 ZNF430Q9H8G1 570 aaPredicted RBP15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 TMEM140Q9NV12 185 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 TMEM56-RWDD3S4R434 201 aa15.27■□□□□ 0.04
PCOLCE-208ENST00000487172 FAM240BA0A1B0GVZ2 78 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 HAX1O00165 279 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 UPK2O00526 184 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 ARPC1BO15143 372 aaKnown RBP15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 ANXA3P12429 323 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 G6PCP35575 357 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 DEFA1P59665 94 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 DEFA3P59666 94 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 NDPQ00604 133 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 TMEM187Q14656 261 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 FXYD3Q14802 87 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 KLHDC1Q8N7A1 406 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 ALX4Q9H161 411 aaPredicted RBP15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 NUBP2Q9Y5Y2 271 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 PLXNB1O43157 2135 aa15.26■□□□□ 0.03
PCOLCE-208ENST00000487172 ATP6V0E1O15342 81 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 EGR2P11161 476 aaPredicted RBP15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 RPL8P62917 257 aaKnown RBP15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 TRIM16LQ309B1 348 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 CENPVQ7Z7K6 275 aaPredicted RBP15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 DUSP18Q8NEJ0 188 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 SGMS2Q8NHU3 365 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 WFDC12Q8WWY7 111 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 ARPC1AQ92747 370 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 IL22RA2Q969J5 263 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 NOL4LQ96MY1 436 aaPredicted RBP15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 ZNF747Q9BV97 191 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 C20orf85Q9H1P6 137 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 PARP11Q9NR21 331 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 FLVCR2Q9UPI3 526 aa15.25■□□□□ 0.03
PCOLCE-208ENST00000487172 ACTL6BO94805 426 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 CNIH1O95406 144 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 TMEM267Q0VDI3 215 aaPredicted RBP15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 TNXAQ16473 311 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 AKIRIN2Q53H80 203 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 ZNF695Q8IW36 515 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 SELENOHQ8IZQ5 122 aaKnown RBP15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 LHFPL5Q8TAF8 219 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 RBPMSQ93062 196 aaKnown RBP15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 TMEM68Q96MH6 324 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 PALMDQ9NP74 551 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 LINC00527Q9UJ94 153 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 FBXO7Q9Y3I1 522 aa15.24■□□□□ 0.03
PCOLCE-208ENST00000487172 TNCP24821 2201 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 TRAV3A0A0B4J244 114 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 PIGBOS1A0A0B4J2F0 54 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 SFT2D2O95562 160 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 IGKV1-5P01602 117 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 P0C879 139 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 HLA-GP17693 338 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 VDAC1P21796 283 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 MECP2P51608 486 aaKnown RBP15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 GNB1P62873 340 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 SLC35B1P78383 322 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 SRPXP78539 464 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 CFHR3Q02985 330 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 PPP1R1AQ13522 171 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 C19orf54Q5BKX5 351 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 H2BFWTQ7Z2G1 175 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 C3orf56Q8N813 242 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 SPATA3Q8NHX4 192 aa15.23■□□□□ 0.03
PCOLCE-208ENST00000487172 TRAV41A0A0B4J266 112 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 PSMB11A5LHX3 300 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 OR4E1P0C645 316 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 OR9G9P0C7N8 305 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 PPIFP30405 207 aaKnown RBP15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 KRTAP10-3P60369 221 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 FAM219AQ8IW50 185 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 LGI3Q8N145 548 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 COMMD1Q8N668 190 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 LRTM2Q8N967 370 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 ENKURQ8TC29 256 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 ABHD5Q8WTS1 349 aa15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 SRSF12Q8WXF0 261 aaKnown RBP15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 LSM10Q969L4 123 aaKnown RBP15.22■□□□□ 0.03
PCOLCE-208ENST00000487172 C9orf170A2RU37 121 aa15.21■□□□□ 0.03
PCOLCE-208ENST00000487172 SNAPC5O75971 98 aa15.21■□□□□ 0.03
PCOLCE-208ENST00000487172 ANXA7P20073 488 aaKnown RBP15.21■□□□□ 0.03
PCOLCE-208ENST00000487172 VAMP1P23763 118 aa15.21■□□□□ 0.03
PCOLCE-208ENST00000487172 RPL27AP46776 148 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms