RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 CTDSPLO15194 276 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 SOX15O60248 233 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 CD74P04233 296 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 SAA1P0DJI8 122 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-208ENST00000476739 VDAC1P21796 283 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 TSPAN5P62079 268 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 RPL23AP62750 156 aaKnown RBP7.58□□□□□ -1.2
HDAC3-208ENST00000476739 GNB1P62873 340 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 SLC35B1P78383 322 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 VAX1Q5SQQ9 334 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 PXDC1Q5TGL8 231 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 TEX38Q6PEX7 206 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF562Q6V9R5 426 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF66Q6ZN08 573 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 CCDC190Q86UF4 302 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 ZBTB34Q8NCN2 500 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 OR51H1Q8NH63 302 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 OSR1Q8TAX0 266 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-208ENST00000476739 SMIM4Q8WVI0 70 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 KLK15Q9H2R5 256 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF580Q9UK33 172 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 PRELID3BQ9Y3B1 194 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 NUBP2Q9Y5Y2 271 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 FABP12A6NFH5 140 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 GATCO43716 136 aaKnown RBP7.57□□□□□ -1.2
HDAC3-208ENST00000476739 PGLYRP1O75594 196 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-208ENST00000476739 IGHG4P01861 327 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 OPN1MWP04001 364 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 RLN1P04808 185 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF735P0CB33 412 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 OPN1MW2P0DN77 364 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 OPN1MW3P0DN78 364 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 PSMB8P28062 276 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 CRIP2P52943 208 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-208ENST00000476739 TAS2R19P59542 299 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 UBE2KP61086 200 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 KIAA0141Q14154 515 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-208ENST00000476739 FXYD3Q14802 87 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 PHLDA2Q53GA4 152 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 RNASE10Q5GAN6 216 aaKnown RBP7.57□□□□□ -1.2
HDAC3-208ENST00000476739 ASPHD1Q5U4P2 390 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 LHFPL1Q86WI0 220 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 SPAG16Q8N0X2 631 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 RNF152Q8N8N0 203 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 TEX45Q8NA69 505 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 TMEM229BQ8NBD8 167 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 LFNGQ8NES3 379 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 OR4S2Q8NH73 311 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 ABHD5Q8WTS1 349 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 C15orf40Q8WUR7 153 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 R3HDM4Q96D70 268 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 RSRP1Q9BUV0 290 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 V9GYH0 126 aa7.57□□□□□ -1.2
HDAC3-208ENST00000476739 A0A1W2PN81 502 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 I3L521 148 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 GPR31O00270 319 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 GSTZ1O43708 216 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-208ENST00000476739 IGLV1-40P01703 118 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 ELANEP08246 267 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 APELAP0DMC3 54 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 MYOD1P15172 320 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 PI3P19957 117 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 CHRNA7P36544 502 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 POLR2GP62487 172 aaKnown RBP eCLIP7.56□□□□□ -1.2
HDAC3-208ENST00000476739 MRPS10P82664 201 aaKnown RBP7.56□□□□□ -1.2
HDAC3-208ENST00000476739 FOXE3Q13461 319 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF79Q15937 498 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 PRSS8Q16651 343 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 VMA21Q3ZAQ7 101 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 ACTBL2Q562R1 376 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 C10orf55Q5SWW7 151 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 STEAP1BQ6NZ63 245 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 UNQ5815/PRO19632Q6UWF5 114 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 ETV3LQ6ZN32 361 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF600Q6ZNG1 722 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 C8orf86Q6ZUL3 223 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 SSX9Q7RTT3 188 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 PUSL1Q8N0Z8 303 aaKnown RBP7.56□□□□□ -1.2
HDAC3-208ENST00000476739 COMMD1Q8N668 190 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 ARPC1AQ92747 370 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 MRGPRFQ96AM1 343 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF430Q9H8G1 570 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-208ENST00000476739 TRAV3A0A0B4J244 114 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 E7EUB6 86 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 KBTBD11O94819 623 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 OR2A4O95047 310 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 S1PR2O95136 353 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 CNIH1O95406 144 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 RAB3DO95716 219 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 HPRT1P00492 218 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 IFNA6P05013 189 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 PF4V1P10720 104 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 RPA2P15927 270 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 SPNP16150 400 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 ZP3P21754 424 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 KIR2DS2P43631 304 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 RAB9AP51151 201 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 UCP3P55916 312 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 SSBP1Q04837 148 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms